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GEO accession:
Sample GSM2825486
Query DataSets for GSM2825486
Status
Public on Oct 20, 2017
Title
ChIP-seq from transverse colon (ENCLB154GSO)
Sample type
SRA
Source name
Homo sapiens transverse colon tissue female adult (51 year)
Organism
Homo sapiens
Characteristics
antibody: Control
tissue_type: transverse colon
biomaterial_type: tissue
biosample encode accession: ENCBS767MTN (SAMN07791204)
Sex: female
lab: Richard Myers, HAIB
age: 51 year
donor_id: ENCDO271OUW
dev stage: adult
link: ENCBS767MTN at ENCODE;
https://www.encodeproject.org/ENCBS767MTN/
link: derived from ENCODE donor ENCDO271OUW;
https://www.encodeproject.org/ENCDO271OUW/
link: high resolution pathology slide image;
https://www.encodeproject.org/documents/7b223824-1a15-4554-b9a1-88b1d9060190/@@download/attachment/84280.svs
link: data sheet;
https://www.encodeproject.org/documents/40ac95fd-dcb1-4172-9163-a32fdde3a101/@@download/attachment/Encode%20Public%20IDs.pdf
Extracted molecule
genomic DNA
Extraction protocol
extraction method: see document
Library strategy
ChIP-Seq
Library source
genomic
Library selection
ChIP
Instrument model
Illumina HiSeq 2000
Description
https://www.encodeproject.org/experiments/ENCSR147NJH/
***************
biological replicate number: 1
technical replicate number: 1
description: Chip-Seq on -human (fragmentation date:Wed Aug 24 2016 00:00:00 GMT-0500 (CDT)
experiment encode accession: ENCSR147NJH
assay title: ChIP-seq
encode release date: 2016-11-09
lab: Richard Myers, HAIB
library encode accession: ENCLB154GSO
Data processing
See GSM*_README.txt supplementary file linked below
Submission date
Oct 19, 2017
Last update date
May 15, 2019
Contact name
ENCODE DCC
E-mail(s)
encode-help@lists.stanford.edu
Organization name
ENCODE DCC
Street address
300 Pasteur Dr
City
Stanford
State/province
CA
ZIP/Postal code
94305-5120
Country
USA
Platform ID
GPL11154
Series (1)
GSE105324
ChIP-seq from transverse colon (ENCSR147NJH)
Relations
BioSample
SAMN07791204
SRA
SRX3321994
Supplementary file
Size
Download
File type/resource
GSM2825486_ENCLB154GSO_README.txt.gz
323 b
(ftp)
(http)
TXT
SRA Run Selector
Raw data are available in SRA
Processed data provided as supplementary file
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