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Sample GSM2700592 Query DataSets for GSM2700592
Status Public on Jul 12, 2017
Title ChIP-seq from upper lobe of left lung (ENCLB929TAJ)
Sample type SRA
Source name Homo sapiens upper lobe of left lung tissue female adult (53 years)
Organism Homo sapiens
Characteristics antibody: H3K27ac
tissue_type: upper lobe of left lung
biomaterial_type: tissue
description: EnTEX: Lung
biosample encode accession: ENCBS684YJH (SAMN07278357)
dev stage: adult
lab: Bradley Bernstein, Broad
age: 53 year
donor_id: ENCDO793LXB
Sex: female
link: ENCBS684YJH at ENCODE;
link: Derived from ENCODE donor ENCDO793LXB;
Extracted molecule genomic DNA
Extraction protocol general protocol:
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina HiSeq 2500
biological replicate number: 1
technical replicate number: 1
experiment encode accession: ENCSR738SXD
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR422TGJ
encode release date: 2016-11-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB929TAJ
size range: 200-600
Data processing See GSM*_README.txt supplementary file linked below
Submission date Jul 12, 2017
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL16791
Series (1)
GSE101265 ChIP-seq from upper lobe of left lung (ENCSR738SXD)
BioSample SAMN07278357
SRA SRX3010136
Named Annotation GSM2700592_ENCFF870RAN_fold_change_over_control_GRCh38.bigWig
Named Annotation GSM2700592_ENCFF466IUA_signal_p-value_GRCh38.bigWig
Named Annotation GSM2700592_ENCFF017IRQ_fold_change_over_control_hg19.bigWig
Named Annotation GSM2700592_ENCFF071QUR_signal_p-value_hg19.bigWig

Supplementary file Size Download File type/resource
GSM2700592_ENCFF017IRQ_fold_change_over_control_hg19.bigWig 638.8 Mb (ftp)(http) BIGWIG
GSM2700592_ENCFF071QUR_signal_p-value_hg19.bigWig 756.0 Mb (ftp)(http) BIGWIG
GSM2700592_ENCFF095NZO_peaks_hg19.bigBed 6.0 Mb (ftp)(http) BIGBED
GSM2700592_ENCFF255UVJ_stable_peaks_hg19.bigBed 3.3 Mb (ftp)(http) BIGBED
GSM2700592_ENCFF466IUA_signal_p-value_GRCh38.bigWig 678.8 Mb (ftp)(http) BIGWIG
GSM2700592_ENCFF661QTR_peaks_GRCh38.bed.gz 2.2 Mb (ftp)(http) BED
GSM2700592_ENCFF667IAI_stable_peaks_hg19.bed.gz 1.6 Mb (ftp)(http) BED
GSM2700592_ENCFF707BRS_peaks_GRCh38.bigBed 5.7 Mb (ftp)(http) BIGBED
GSM2700592_ENCFF739WJV_stable_peaks_GRCh38.bigBed 3.2 Mb (ftp)(http) BIGBED
GSM2700592_ENCFF752URW_peaks_hg19.bed.gz 2.3 Mb (ftp)(http) BED
GSM2700592_ENCFF870RAN_fold_change_over_control_GRCh38.bigWig 625.9 Mb (ftp)(http) BIGWIG
GSM2700592_ENCFF963YDV_stable_peaks_GRCh38.bed.gz 1.6 Mb (ftp)(http) BED
GSM2700592_ENCLB929TAJ_README.txt.gz 1.1 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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