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Sample GSM2700502 Query DataSets for GSM2700502
Status Public on Jul 12, 2017
Title ChIP-seq from body of pancreas (ENCLB149DDE)
Sample type SRA
Source name Homo sapiens body of pancreas tissue male adult (54 years)
Organism Homo sapiens
Characteristics antibody: H3K27ac
tissue_type: body of pancreas
biomaterial_type: tissue
description: EnTEX: Pancreas
biosample encode accession: ENCBS209WBW (SAMN06464347)
dev stage: adult
Sex: male
donor_id: ENCDO451RUA
age: 54 year
lab: Bradley Bernstein, Broad
link: ENCBS209WBW at ENCODE;
link: Derived from ENCODE donor ENCDO451RUA;
Extracted molecule genomic DNA
Extraction protocol general protocol:
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina HiSeq 2500
biological replicate number: 1
technical replicate number: 1
experiment encode accession: ENCSR596PFU
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR099LGH
encode release date: 2016-07-28
lab: Bradley Bernstein, Broad
library encode accession: ENCLB149DDE
size range: 200-600
Data processing See GSM*_README.txt supplementary file linked below
Submission date Jul 11, 2017
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL16791
Series (1)
GSE101231 ChIP-seq from body of pancreas (ENCSR596PFU)
BioSample SAMN06464347
SRA SRX3010086
Named Annotation GSM2700502_ENCFF090XYL_fold_change_over_control_hg19.bigWig
Named Annotation GSM2700502_ENCFF548KBM_fold_change_over_control_GRCh38.bigWig
Named Annotation GSM2700502_ENCFF946SUV_signal_p-value_GRCh38.bigWig
Named Annotation GSM2700502_ENCFF554AUP_signal_p-value_hg19.bigWig

Supplementary file Size Download File type/resource
GSM2700502_ENCFF023CGC_peaks_hg19.bigBed 4.8 Mb (ftp)(http) BIGBED
GSM2700502_ENCFF090XYL_fold_change_over_control_hg19.bigWig 936.3 Mb (ftp)(http) BIGWIG
GSM2700502_ENCFF186FLZ_stable_peaks_hg19.bigBed 3.1 Mb (ftp)(http) BIGBED
GSM2700502_ENCFF227ZLQ_stable_peaks_hg19.bed.gz 1.5 Mb (ftp)(http) BED
GSM2700502_ENCFF230XMP_peaks_GRCh38.bigBed 4.8 Mb (ftp)(http) BIGBED
GSM2700502_ENCFF503SNH_peaks_hg19.bed.gz 1.8 Mb (ftp)(http) BED
GSM2700502_ENCFF548KBM_fold_change_over_control_GRCh38.bigWig 932.5 Mb (ftp)(http) BIGWIG
GSM2700502_ENCFF554AUP_signal_p-value_hg19.bigWig 1.0 Gb (ftp)(http) BIGWIG
GSM2700502_ENCFF573CFJ_stable_peaks_GRCh38.bed.gz 1.5 Mb (ftp)(http) BED
GSM2700502_ENCFF922URN_peaks_GRCh38.bed.gz 1.8 Mb (ftp)(http) BED
GSM2700502_ENCFF946SUV_signal_p-value_GRCh38.bigWig 1.1 Gb (ftp)(http) BIGWIG
GSM2700502_ENCFF963WIG_stable_peaks_GRCh38.bigBed 3.1 Mb (ftp)(http) BIGBED
GSM2700502_ENCLB149DDE_README.txt.gz 1.1 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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