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Sample GSM2700106

Query DataSets for GSM2700106

Status

Public on Jul 12, 2017

Title

ChIP-seq from thyroid gland (ENCLB787GDK)

Sample type

SRA

Source name

Homo sapiens thyroid gland tissue female adult (53 years)

Organism

Homo sapiens

Characteristics

antibody: Control
tissue_type: thyroid gland
biomaterial_type: tissue
description: EnTEX: Thyroid
biosample encode accession: ENCBS586UUR (SAMN07278362)
dev stage: adult
lab: Bradley Bernstein, Broad
age: 53 year
donor_id: ENCDO793LXB
Sex: female
link: ENCBS586UUR at ENCODE; https://www.encodeproject.org/ENCBS586UUR/
link: Derived from ENCODE donor ENCDO793LXB; https://www.encodeproject.org/ENCDO793LXB/

Extracted molecule

genomic DNA

Extraction protocol

general protocol: https://www.encodeproject.org/documents/69af4be8-3a50-4819-9642-ffb6db747469/@@download/attachment/whole_cell_extract_library_construction_v1.0.pdf

Library strategy

ChIP-Seq

Library source

genomic

Library selection

ChIP

Instrument model

Illumina HiSeq 2500

Description

https://www.encodeproject.org/experiments/ENCSR475NOQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR475NOQ
assay title: ChIP-seq
encode release date: 2016-08-09
lab: Bradley Bernstein, Broad
library encode accession: ENCLB787GDK
size range: 200-600

Data processing

See GSM*_README.txt supplementary file linked below

Submission date

Jul 11, 2017

Last update date

May 15, 2019

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platform ID

GPL16791

Series (1)

GSE101172

ChIP-seq from thyroid gland (ENCSR475NOQ)

Relations

BioSample

SAMN07278362

SRA

SRX3010048

Supplementary file	Size	Download	File type/resource
GSM2700106_ENCLB787GDK_README.txt.gz	341 b	(ftp)(http)	TXT
SRA Run Selector
Raw data are available in SRA
Processed data provided as supplementary file