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| Status |
Public on Oct 01, 2004 |
| Title |
GEIM86-U133A-DM |
| Sample type |
RNA |
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| Source name |
muscle
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| Organism |
Homo sapiens |
| Extracted molecule |
total RNA |
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| Description |
Muscle biopsy specimen from a patient with dermatomyositis (DM)
Keywords = Inflammatory myopathy, Dermatomyositis, Inclusion body myositis, Polymyositis, MxA, plasmacytoid dendritic cells, Innate immunity, Interferon-alpha
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| Submission date |
Jul 05, 2004 |
| Last update date |
May 27, 2005 |
| Contact name |
Steven Alan Greenberg |
| E-mail(s) |
sagreenberg@partners.org
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| Phone |
617 732-8641
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| Fax |
617 730-2885
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| Organization name |
Brigham and Women's Hospital
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| Department |
Neurology
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| Lab |
Division of Neuromuscular Disease
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| Street address |
75 Francis Street
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| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02115 |
| Country |
USA |
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| Platform ID |
GPL96 |
| Series (1) |
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| Data table header descriptions |
| ID_REF |
Affymetrix U133A probeset ID |
| VALUE |
'signal' a measure of the abundance of a transcript |
| ABS_CALL |
the call (Detection) in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC) |
| DETECTION P-VALUE |
'detection p-value', p-value that indicates the significance level of the detection call |
| Data table |
| ID_REF |
VALUE |
ABS_CALL |
DETECTION P-VALUE |
| AFFX-BioB-5_at |
1249.4 |
P |
0.01667 |
| AFFX-BioB-M_at |
2470.4 |
P |
0.000581 |
| AFFX-BioB-3_at |
913.6 |
P |
0.002867 |
| AFFX-BioC-5_at |
3972.3 |
P |
0.000195 |
| AFFX-BioC-3_at |
2984.3 |
P |
0.000258 |
| AFFX-BioDn-5_at |
3069.8 |
P |
0.00007 |
| AFFX-BioDn-3_at |
23571 |
P |
0.000225 |
| AFFX-CreX-5_at |
32865.2 |
P |
0.000044 |
| AFFX-CreX-3_at |
62319.5 |
P |
0.000044 |
| AFFX-DapX-5_at |
107.9 |
A |
0.470241 |
| AFFX-DapX-M_at |
233.4 |
A |
0.131361 |
| AFFX-DapX-3_at |
44.7 |
A |
0.794268 |
| AFFX-LysX-5_at |
27.8 |
A |
0.455413 |
| AFFX-LysX-M_at |
236.7 |
A |
0.368438 |
| AFFX-LysX-3_at |
117 |
A |
0.39692 |
| AFFX-PheX-5_at |
23.5 |
A |
0.804734 |
| AFFX-PheX-M_at |
21.3 |
A |
0.937071 |
| AFFX-PheX-3_at |
64.5 |
A |
0.794268 |
| AFFX-ThrX-5_at |
60.7 |
A |
0.814869 |
| AFFX-ThrX-M_at |
191.1 |
A |
0.368438 |
Total number of rows: 22283
Table truncated, full table size 604 Kbytes.
| Supplementary data files not provided |
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