|
| Status |
Public on May 04, 2017 |
| Title |
CS14-12408 [H3K27me3] |
| Sample type |
SRA |
| |
|
| Source name |
Embryonic Craniofacial Tissue
|
| Organism |
Homo sapiens |
| Characteristics |
developmental stage: CS14
tissue: craniofacial prominences
antibody: H3K27me3
cat no./lot: 07-449 (Lot 2736613)
|
| Treatment protocol |
Cotney and Noonan, CSHL Protocols 2015.
|
| Growth protocol |
Samples flash frozen immediately after collection by HDBR
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Cotney and Noonan, CSHL Protocols 2015.
Rubicon Genomics Thruplex 48S
|
| |
|
| Library strategy |
ChIP-Seq |
| Library source |
genomic |
| Library selection |
ChIP |
| Instrument model |
Illumina NextSeq 500 |
| |
|
| Data processing |
The raw FASTQ sequence files are being deposited in dbGAP
Data processing details are included in supplementary file (GSE97752_DATA_PROCESSING_INFO.xls) linked at the foot of GSE97752.
|
| |
|
| Submission date |
Apr 13, 2017 |
| Last update date |
May 12, 2020 |
| Contact name |
Justin Cotney |
| E-mail(s) |
cotney@uchc.edu
|
| Organization name |
UConn Health
|
| Department |
Genetics and Genome Sciences
|
| Lab |
Cotney Lab
|
| Street address |
400 Farmington Ave.
|
| City |
Farmington |
| State/province |
CT |
| ZIP/Postal code |
06030-6403 |
| Country |
USA |
| |
|
| Platform ID |
GPL18573 |
| Series (1) |
| GSE97752 |
Epigenomic Atlas of Early Human Craniofacial Development |
|
| Relations |
| BioSample |
SAMN06733978 |
