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Sample GSM25586 Query DataSets for GSM25586
Status Public on Aug 12, 2004
Title GM12252_rep1
Sample type RNA
 
Source name Lymphoblastoid cell line
Organism Homo sapiens
Characteristics Coriell cell line repository identifier: GM12252
http://locus.umdnj.edu/nigms/nigms_cgi/display.cgi?GM12252


Biomaterial provider Coriell Cell Repositories

Coriell
Extracted molecule total RNA
 
Description Sample description = RNA was extracted from lymphoblastoid cells of members of the CEPH Utah pedigrees. The cells were grown at a density of 5 x 105 cells/ ml in RPMI 1640 with 15% FBS, 1% penicillin-streptomycin, 2mM L-glutamine at 37°C in a humidified 5% CO2 chamber. RNA samples were processed and hybridized onto the Affymetrix Human Focus Arrays according to the manufacturer’s suggestion. Arrays were scanned and analyzed using MAS 5.0 software (Affymetrix).
 
Submission date Jun 17, 2004
Last update date Nov 30, 2005
Contact name Michael Patrick Morley
E-mail(s) mmorley@pennmedicine.upenn.edu
Phone 215-898-2026
Organization name Perelman School of Medicine at the University of Pennsylvania
Department Penn Cardiovascular Institute
Street address 3400 Civic Center Blvd, Bldg 421
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platform ID GPL201
Series (1)
GSE1485 Natural variation in human gene expression

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)

Data table
ID_REF VALUE ABS_CALL
1007_s_at 252.4 P
1053_at 631.2 P
117_at 120.5 P
121_at 679.9 P
1255_g_at 6.2 A
1294_at 511.6 P
1316_at 93.5 P
1320_at 33.7 A
1431_at 29.5 A
1438_at 20 A
1487_at 368.1 P
1494_f_at 204.2 P
1598_g_at 256.6 A
160020_at 238.2 P
1729_at 413.1 P
1773_at 123.9 A
177_at 149.9 P
1861_at 130.9 P
200000_s_at 2283.4 P
200001_at 2855.4 P

Total number of rows: 8793

Table truncated, full table size 157 Kbytes.




Supplementary file Size Download File type/resource
GSM25586.CEL.gz 1.4 Mb (ftp)(http) CEL

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