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Sample GSM2534549 Query DataSets for GSM2534549
Status Public on Mar 12, 2017
Title ChIP-seq from cardiac muscle cell (ENCLB142HEK)
Sample type SRA
 
Source name Homo sapiens cardiac muscle in vitro differentiated cells fetal
Organism Homo sapiens
Characteristics antibody: Control
cell_type: cardiac muscle cell
biomaterial_type: in vitro differentiated cells
biosample encode accession: ENCBS343AKO (SAMN05897106)
age: unknown
dev stage: fetal
donor_id: ENCDO924HBJ
Sex: not collected
lab: John Stamatoyannopoulos, UW
link: ENCBS343AKO at ENCODE; https://www.encodeproject.org/ENCBS343AKO/
link: Derived from ENCODE donor ENCDO924HBJ; https://www.encodeproject.org/ENCDO924HBJ/
Extracted molecule genomic DNA
Extraction protocol general protocol: https://www.encodeproject.org/documents/69af4be8-3a50-4819-9642-ffb6db747469/@@download/attachment/whole_cell_extract_library_construction_v1.0.pdf
general protocol: https://www.encodeproject.org/documents/69af4be8-3a50-4819-9642-ffb6db747469/@@download/attachment/whole_cell_extract_library_construction_v1.0.pdf
 
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina HiSeq 2500
 
Description https://www.encodeproject.org/experiments/ENCSR867SJE/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR867SJE
assay title: ChIP-seq
encode release date: 2016-11-03
lab: Bradley Bernstein, Broad
library encode accession: ENCLB142HEK
size range: 200-600
Data processing See GSM*_README.txt supplementary file linked below
 
Submission date Mar 12, 2017
Last update date May 15, 2019
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platform ID GPL16791
Series (1)
GSE96431 ChIP-seq from cardiac muscle cell (ENCSR867SJE)
Relations
BioSample SAMN05897106
SRA SRX2636408

Supplementary file Size Download File type/resource
GSM2534549_ENCLB142HEK_README.txt.gz 426 b (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record
Processed data provided as supplementary file

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