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Sample GSM2534501 Query DataSets for GSM2534501
Status Public on Mar 12, 2017
Title ChIP-seq from ACC112 (ENCLB078QSR)
Sample type SRA
 
Source name Homo sapiens ACC112 immortalized cell line
Organism Homo sapiens
Characteristics antibody: Control
line: ACC112
biomaterial_type: immortalized cell line
description: adenoid cystic carcinoma cell line supplied by Lurdes Queimado, M.D., Ph.D.Phone: 405-271-4232 (office); 405-271-4279 (lab); cells immortalized by infection with a retrovirus expressing HPV16 E6 and E7
biosample encode accession: ENCBS827JIC (SAMN06464525)
dev stage: adult
Sex: male
age: 70 year
health state: submaxillar tumor
lab: Bradley Bernstein, Broad
link: ENCBS827JIC at ENCODE; https://www.encodeproject.org/ENCBS827JIC/
link: Derived from ENCODE donor ENCDO085ZKK; https://www.encodeproject.org/ENCDO085ZKK/
link: ENCODE dbxrefs Cellosaurus CVCL_Y492; http://web.expasy.org/cellosaurus/CVCL_Y492
Extracted molecule genomic DNA
Extraction protocol not provided
 
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina HiSeq 2500
 
Description https://www.encodeproject.org/experiments/ENCSR836XKP/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR836XKP
assay title: ChIP-seq
encode release date: 2016-10-27
lab: Bradley Bernstein, Broad
library encode accession: ENCLB078QSR
size range: 200-600
Data processing See GSM*_README.txt supplementary file linked below
 
Submission date Mar 12, 2017
Last update date May 15, 2019
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platform ID GPL16791
Series (1)
GSE96407 ChIP-seq from ACC112 (ENCSR836XKP)
Relations
BioSample SAMN06464525
SRA SRX2636378

Supplementary file Size Download File type/resource
GSM2534501_ENCLB078QSR_README.txt.gz 427 b (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record
Processed data provided as supplementary file

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