GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Sample GSM2534167 Query DataSets for GSM2534167
Status Public on Mar 12, 2017
Title ChIP-seq from Loucy (ENCLB952IZL)
Sample type SRA
Source name Homo sapiens Loucy immortalized cell line
Organism Homo sapiens
Characteristics antibody: H3K27ac
line: Loucy
biomaterial_type: immortalized cell line
description: Established in 1987 from the peripheral blood of a patient with T-cell acute lymphoblastic leukemia (T-ALL) obtained two months prior to her death. May be of value in evaluating the role of t(16;20) in the etiology of T-ALL.
biosample encode accession: ENCBS080PZG (SAMN06464314)
dev stage: adult
Sex: female
age: 38 year
health state: T-cell acute lymphoblastic leukemia cell line ATCC CRL-2629
lab: Bradley Bernstein, Broad
link: ENCBS080PZG at ENCODE;
link: Derived from ENCODE donor ENCDO732PDS;
link: ENCODE dbxrefs Cellosaurus CVCL_1380;
link: ATCC sample source;
Extracted molecule genomic DNA
Extraction protocol extraction method: see document
general protocol:
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina HiSeq 2000
biological replicate number: 2
technical replicate number: 1
experiment encode accession: ENCSR566GSO
assay title: ChIP-seq
assembly: hg19, GRCh38
possible controls: ENCSR648HLP
encode release date: 2014-09-04
lab: Bradley Bernstein, Broad
library encode accession: ENCLB952IZL
size range: 200-600
Data processing See GSM*_README.txt supplementary file linked below
Submission date Mar 12, 2017
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL11154
Series (1)
GSE96242 ChIP-seq from Loucy (ENCSR566GSO)
BioSample SAMN06464314
SRA SRX2636029

Supplementary file Size Download File type/resource
GSM2534167_ENCLB952IZL_README.txt.gz 2.0 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap