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Sample GSM2533917 Query DataSets for GSM2533917
Status Public on Mar 12, 2017
Title ChIP-seq from PC-3 (ENCLB936UNC)
Sample type SRA
 
Source name Homo sapiens PC-3 immortalized cell line
Organism Homo sapiens
Characteristics antibody: Control
line: PC-3
biomaterial_type: immortalized cell line
description: prostate cancer cell line
biosample encode accession: ENCBS451OVM (SAMN06464412)
dev stage: adult
Sex: male
age: 62 year
health state: grade IV, adenocarcinoma
passage number: 3
lab: Bradley Bernstein, Broad
link: ENCBS451OVM at ENCODE; https://www.encodeproject.org/ENCBS451OVM/
link: Derived from ENCODE donor ENCDO349AAA; https://www.encodeproject.org/ENCDO349AAA/
link: ENCODE dbxrefs Cellosaurus CVCL_0035; http://web.expasy.org/cellosaurus/CVCL_0035
link: ATCC sample source; http://www.atcc.org/products/all/CRL-1435.aspx
Extracted molecule genomic DNA
Extraction protocol extraction method: see document
general protocol: https://www.encodeproject.org/documents/864ba3a4-4c71-4c58-bf07-b138977bf6c7/@@download/attachment/EpigenomicsMagBeadChIPv.1.2exp.pdf
 
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina HiSeq 2000
 
Description https://www.encodeproject.org/experiments/ENCSR328AHC/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR328AHC
assay title: ChIP-seq
encode release date: 2015-08-03
lab: Bradley Bernstein, Broad
library encode accession: ENCLB936UNC
size range: 300-600
instrument models: Illumina HiSeq 2000,Illumina HiSeq 2500
Data processing See GSM*_README.txt supplementary file linked below
 
Submission date Mar 12, 2017
Last update date May 15, 2019
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platform ID GPL11154
Series (1)
GSE96117 ChIP-seq from PC-3 (ENCSR328AHC)
Relations
BioSample SAMN06464412
SRA SRX2635866

Supplementary file Size Download File type/resource
GSM2533917_ENCLB936UNC_README.txt.gz 404 b (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record
Processed data provided as supplementary file

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