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Sample GSM2527605 Query DataSets for GSM2527605
Status Public on Mar 09, 2017
Title ChIP-seq from smooth muscle cell (ENCLB891RKX)
Sample type SRA
Source name Homo sapiens smooth muscle in vitro differentiated cells female embryo (5 days) derived from H9
Organism Homo sapiens
Characteristics antibody: H3K27ac
cell_type: smooth muscle cell
biomaterial_type: in vitro differentiated cells
description: Frozen or fixed, in vitro differentiated smooth muscle cells from ES WA09 (H9) by the SESCC for use by the ENCODE consortia
biosample encode accession: ENCBS899TTJ (SAMN04284498)
age: 5 day
donor_id: ENCDO222AAA
dev stage: embryonic
Sex: female
health state: healthy
lab: Richard Myers, HAIB
link: ENCBS899TTJ at ENCODE;
link: Derived from ENCODE donor ENCDO222AAA;
link: differentiation protocol;
Extracted molecule genomic DNA
Extraction protocol general protocol:
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina HiSeq 2500
biological replicate number: 2
technical replicate number: 2
experiment encode accession: ENCSR210ZPC
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR729MRJ
encode release date: 2016-04-27
lab: Bradley Bernstein, Broad
library encode accession: ENCLB891RKX
size range: 200-600
nucleic acid starting quantity: 60.06
nucleic acid starting quantity units: ng
Data processing See GSM*_README.txt supplementary file linked below
Submission date Mar 09, 2017
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL16791
Series (1)
GSE95986 ChIP-seq from smooth muscle cell (ENCSR210ZPC)
BioSample SAMN04284498
SRA SRX2630350

Supplementary file Size Download File type/resource
GSM2527605_ENCLB891RKX_README.txt.gz 1.7 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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