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Sample GSM2527539

Query DataSets for GSM2527539

Status

Public on Mar 09, 2017

Title

ChIP-seq from thoracic aorta (ENCLB000ORB)

Sample type

SRA

Source name

Homo sapiens thoracic aorta tissue male adult (37 years)

Organism

Homo sapiens

Characteristics

antibody: Control
tissue_type: thoracic aorta
biomaterial_type: tissue
description: EnTEX: Artery- Aorta
biosample encode accession: ENCBS882JUX (SAMN06464548)
dev stage: adult
Sex: male
donor_id: ENCDO845WKR
age: 37 year
lab: Bradley Bernstein, Broad
link: ENCBS882JUX at ENCODE; https://www.encodeproject.org/ENCBS882JUX/
link: Derived from ENCODE donor ENCDO845WKR; https://www.encodeproject.org/ENCDO845WKR/

Extracted molecule

genomic DNA

Extraction protocol

general protocol: https://www.encodeproject.org/documents/be2a0f12-af38-430c-8f2d-57953baab5f5/@@download/attachment/Epigenomics_Alternative_Mag_Bead_ChIP_Protocol_v1.1_exp.pdf

Library strategy

ChIP-Seq

Library source

genomic

Library selection

ChIP

Instrument model

Illumina HiSeq 2500

Description

https://www.encodeproject.org/experiments/ENCSR158PLZ/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR158PLZ
assay title: ChIP-seq
encode release date: 2016-08-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB000ORB
size range: 200-600

Data processing

See GSM*_README.txt supplementary file linked below

Submission date

Mar 09, 2017

Last update date

May 15, 2019

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platform ID

GPL16791

Series (1)

GSE95954

ChIP-seq from thoracic aorta (ENCSR158PLZ)

Relations

BioSample

SAMN06464548

SRA

SRX2630277

Supplementary file	Size	Download	File type/resource
GSM2527539_ENCLB000ORB_README.txt.gz	431 b	(ftp)(http)	TXT
SRA Run Selector
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record