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Sample GSM2424225 Query DataSets for GSM2424225
Status Public on Jan 04, 2017
Title ChIP-seq from liver (ENCLB188IIF)
Sample type SRA
Source name Mus musculus strain B6NCrl liver tissue mixed sex embryo (14.5 days)
Organism Mus musculus
Characteristics antibody: EP300
tissue_type: liver
biomaterial_type: tissue
description: pulverized livers pooled from multiple dissections of embryonic 14.5 day mice
biosample encode accession: ENCBS464EKT (SAMN06122466)
dev stage: embryonic
donor_id: ENCDO956IXV
age: 14.5 day
Sex: pooled male and female
lab: Richard Myers, HAIB
link: ENCBS464EKT at ENCODE;
link: Derived from ENCODE donor ENCDO956IXV;
Extracted molecule genomic DNA
Extraction protocol general protocol:
general protocol:
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina HiSeq 2000
biological replicate number: 1
technical replicate number: 1
description: Chip-Seq on e14.5 liver
experiment encode accession: ENCSR982LJQ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR982SZZ, ENCSR321TTR
encode release date: 2016-05-17
lab: Richard Myers, HAIB
library encode accession: ENCLB188IIF
Data processing See GSM*_README.txt supplementary file linked below
Submission date Dec 11, 2016
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL13112
Series (1)
GSE92206 ChIP-seq from liver (ENCSR982LJQ)
BioSample SAMN06122466
SRA SRX2424683
Named Annotation GSM2424225_ENCFF845YIG_peaks_mm10.bed.gz
Named Annotation GSM2424225_ENCFF704DPP_fold_change_over_control_mm10.bigWig
Named Annotation GSM2424225_ENCFF205DDI_signal_p-value_mm10.bigWig

Supplementary file Size Download File type/resource
GSM2424225_ENCFF205DDI_signal_p-value_mm10.bigWig 296.4 Mb (ftp)(http) BIGWIG
GSM2424225_ENCFF406NAB_peaks_mm10.bigBed 10.3 Mb (ftp)(http) BIGBED
GSM2424225_ENCFF704DPP_fold_change_over_control_mm10.bigWig 330.6 Mb (ftp)(http) BIGWIG
GSM2424225_ENCFF845YIG_peaks_mm10.bed.gz 4.4 Mb (ftp)(http) BED
GSM2424225_ENCLB188IIF_README.txt.gz 1.2 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record
Processed data provided as supplementary file

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