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Sample GSM2337755 Query DataSets for GSM2337755
Status Public on Dec 05, 2017
Title 132a
Sample type RNA
 
Source name Whole blood (PAXgene RNA)
Organism Homo sapiens
Characteristics male: 0
africanamerican: 0
caucasian: 1
asian: 0
age: 52
bmi: 24.32
smoking: 0
stress: 10
depression: 0
anxiety: 6
loneliness: 13
i: 7.45
we: 0.5
you: 2.59
shehe: 1.45
they: 0.99
impersonal pronoun: 8.97
article: 3.78
preposition: 9.75
auxilary verb: 11.22
negation: 2.99
conjunction: 8.12
quantifier: 2.21
adverb: 5.82
cdi: -36.57
alone: 0.67
talking: 0.46
wordcount: 36031.71
wordspersentence: 9.91
cd14: -0.92608
cd19: 1.38483
cd3d: 0.66897
cd4: -1.60656
cd8a: -1.59473
ncam1: 5.14682
fcgr3a: 2.93497
Extracted molecule total RNA
Extraction protocol Total RNA was extracted from primary peripheral blood samples (Tempus RNA Tubes; ThermoFisher) using the manufacturer's standard protocol & reagents.
Label biotin
Label protocol Ambion TotalPrep target synthesis for gene expression profiling (carried out UCLA Neuroscience Genomics Core).
 
Hybridization protocol Standard Illumina hybridization protocol for cRNA target (carried out by UCLA Neuroscience Genomics Core).
Scan protocol Standard Illumina scan protocol for gene expression profiling (carried out by UCLA Neuroscience Genomics Core).
Description 9248833125_F.AVG_Signal
Data processing Raw probe intensity values and quantile-normalized gene expression values were generated by Illumina GenomeStudio software using Gene Expression module 1.1.1. All probe and gene values are provided, with no additional filtering.
 
Submission date Oct 05, 2016
Last update date Dec 05, 2017
Contact name Steve Cole
Organization name UCLA School of Medicine
Department Medicine
Street address 11-934 Factor Bldg, UCLA
City Los Angeles
State/province CA
ZIP/Postal code 90095-1678
Country USA
 
Platform ID GPL10904
Series (1)
GSE87656 Leukocyte gene regulation and patterns of natural language use.

Data table header descriptions
ID_REF
VALUE quantile-normalized gene expression values.

Data table
ID_REF VALUE
7A5 205.4742
A1BG 125.8891
A1CF 121.9903
A26C3 126.6823
A2BP1 106.8943
A2LD1 121.0592
A2M 112.7389
A2ML1 110.8918
A3GALT2 131.9863
A4GALT 112.5099
A4GNT 133.6915
AAA1 124.6135
AAAS 107.4908
AACS 115.0875
AACSL 150.7083
AADAC 114.8316
AADACL1 184.4348
AADACL2 120.7544
AADACL3 140.3053
AADACL4 109.5379

Total number of rows: 32340

Table truncated, full table size 543 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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