|
Status |
Public on Dec 05, 2017 |
Title |
132a |
Sample type |
RNA |
|
|
Source name |
Whole blood (PAXgene RNA)
|
Organism |
Homo sapiens |
Characteristics |
male: 0 africanamerican: 0 caucasian: 1 asian: 0 age: 52 bmi: 24.32 smoking: 0 stress: 10 depression: 0 anxiety: 6 loneliness: 13 i: 7.45 we: 0.5 you: 2.59 shehe: 1.45 they: 0.99 impersonal pronoun: 8.97 article: 3.78 preposition: 9.75 auxilary verb: 11.22 negation: 2.99 conjunction: 8.12 quantifier: 2.21 adverb: 5.82 cdi: -36.57 alone: 0.67 talking: 0.46 wordcount: 36031.71 wordspersentence: 9.91 cd14: -0.92608 cd19: 1.38483 cd3d: 0.66897 cd4: -1.60656 cd8a: -1.59473 ncam1: 5.14682 fcgr3a: 2.93497
|
Extracted molecule |
total RNA |
Extraction protocol |
Total RNA was extracted from primary peripheral blood samples (Tempus RNA Tubes; ThermoFisher) using the manufacturer's standard protocol & reagents.
|
Label |
biotin
|
Label protocol |
Ambion TotalPrep target synthesis for gene expression profiling (carried out UCLA Neuroscience Genomics Core).
|
|
|
Hybridization protocol |
Standard Illumina hybridization protocol for cRNA target (carried out by UCLA Neuroscience Genomics Core).
|
Scan protocol |
Standard Illumina scan protocol for gene expression profiling (carried out by UCLA Neuroscience Genomics Core).
|
Description |
9248833125_F.AVG_Signal
|
Data processing |
Raw probe intensity values and quantile-normalized gene expression values were generated by Illumina GenomeStudio software using Gene Expression module 1.1.1. All probe and gene values are provided, with no additional filtering.
|
|
|
Submission date |
Oct 05, 2016 |
Last update date |
Dec 05, 2017 |
Contact name |
Steve Cole |
Organization name |
UCLA School of Medicine
|
Department |
Medicine
|
Street address |
11-934 Factor Bldg, UCLA
|
City |
Los Angeles |
State/province |
CA |
ZIP/Postal code |
90095-1678 |
Country |
USA |
|
|
Platform ID |
GPL10904 |
Series (1) |
GSE87656 |
Leukocyte gene regulation and patterns of natural language use. |
|