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Sample GSM2308542 Query DataSets for GSM2308542
Status Public on Oct 14, 2016
Title ChIP-seq from OCI-LY1 (ENCLB367EFH)
Sample type SRA
 
Source name Homo sapiens OCI-LY1 immortalized cell line
Organism Homo sapiens
Characteristics antibody: Control
line: OCI-LY1
biomaterial_type: immortalized cell line
description: established from the bone marrow of a 44-year-old man with B-cell Non-Hodgkin lymphoma (B-NHL; diffuse large cell), stage 4B at relapse in 1983
biosample encode accession: ENCBS397COL (SAMN05733857)
age: 44 year
dev stage: adult
Sex: male
health state: B cell lymphoma
lab: Bradley Bernstein, Broad
link: ENCBS397COL at ENCODE; https://www.encodeproject.org/ENCBS397COL/
link: Derived from ENCODE donor ENCDO350AAA; https://www.encodeproject.org/ENCDO350AAA/
link: ENCODE dbxrefs Cellosaurus CVCL_1879; http://web.expasy.org/cellosaurus/CVCL_1879
Extracted molecule genomic DNA
Extraction protocol extraction method: see document
general protocol: https://www.encodeproject.org/documents/dc2b7414-3879-49b3-b862-349fadbc5d8d/@@download/attachment/ChIP_Protocol_For_Fresh_or%20Frozen_Cells_v09.3.pdf
 
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina HiSeq 2000
 
Description https://www.encodeproject.org/experiments/ENCSR569IIN/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR569IIN
assay title: ChIP-seq
encode release date: 2014-07-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB367EFH
size range: 200-600
instrument models: Illumina HiSeq 2000,Illumina HiSeq 2500
Data processing See GSM*_README.txt supplementary file linked below
 
Submission date Sep 09, 2016
Last update date May 15, 2019
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platform ID GPL11154
Series (1)
GSE86720 ChIP-seq from OCI-LY1 (ENCSR569IIN)
Relations
BioSample SAMN05733857
SRA SRX2156962

Supplementary file Size Download File type/resource
GSM2308542_ENCLB367EFH_README.txt.gz 263 b (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
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