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Sample GSM2308464 Query DataSets for GSM2308464
Status Public on Oct 14, 2016
Title ChIP-seq from SUDHL6 (ENCLB944MPB)
Sample type SRA
 
Source name Homo sapiens SUDHL6 immortalized cell line
Organism Homo sapiens
Characteristics antibody: Control
line: SUDHL6
biomaterial_type: immortalized cell line
description: also called SU-DHL-6 (diffuse histiocytic lymphoma) - disease: large cell lymphoma; diffuse mixed histiocytic and lymphocytic lymphoma; follicular B cell lymphoma; ATCC CRL-2959
biosample encode accession: ENCBS136LHJ (SAMN05733849)
age: 43 year
dev stage: adult
Sex: male
health state: large cell lymphoma; diffuse mixed histiocytic and lymphocytic lymphoma; follicular B cell lymphoma
lab: Bradley Bernstein, Broad
link: ENCBS136LHJ at ENCODE; https://www.encodeproject.org/ENCBS136LHJ/
link: Derived from ENCODE donor ENCDO353AAA; https://www.encodeproject.org/ENCDO353AAA/
link: ENCODE dbxrefs Cellosaurus CVCL_2206; http://web.expasy.org/cellosaurus/CVCL_2206
Extracted molecule genomic DNA
Extraction protocol extraction method: see document
general protocol: https://www.encodeproject.org/documents/be2a0f12-af38-430c-8f2d-57953baab5f5/@@download/attachment/Epigenomics_Alternative_Mag_Bead_ChIP_Protocol_v1.1_exp.pdf
 
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina HiSeq 2500
 
Description https://www.encodeproject.org/experiments/ENCSR179YLS/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR179YLS
assay title: ChIP-seq
encode release date: 2014-07-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB944MPB
size range: 200-600
Data processing See GSM*_README.txt supplementary file linked below
 
Submission date Sep 09, 2016
Last update date May 15, 2019
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platform ID GPL16791
Series (1)
GSE86683 ChIP-seq from SUDHL6 (ENCSR179YLS)
Relations
BioSample SAMN05733849
SRA SRX2156878

Supplementary file Size Download File type/resource
GSM2308464_ENCLB944MPB_README.txt.gz 240 b (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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