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GEO accession:
Sample GSM2264779
Query DataSets for GSM2264779
Status
Public on Jun 19, 2017
Title
kidney_p1_wt, biological rep1
Sample type
RNA
Source name
kidney, control
Organism
Mus musculus
Characteristics
tissue: kidney
genotype/variation: wild type
developmental stage: postnatal day 1 (P1)
Extracted molecule
total RNA
Extraction protocol
total RNA was purified by Qiagen RNAeasy Mini Kit according to the manufacturer's instructions.
Label
biotin
Label protocol
Affymetrix 3' IVT PLUS KIT according to manufacturer's instructions
Hybridization protocol
performed at Columbia Core Facilities
Scan protocol
performed at Columbia Core Facilities
Data processing
Affymetrix Console
Submission date
Aug 08, 2016
Last update date
Jun 20, 2017
Contact name
Max Werth
Organization name
Columbia University
Department
Medicine
Street address
1150 St. Nicholas Ave.
City
New York
State/province
NY
ZIP/Postal code
10032
Country
USA
Platform ID
GPL1261
Series (2)
GSE85325
Tfcp2l1 controls cellular patterning of the collecting duct.
GSE87769
Identification of Tfcp2l1 target genes in the mouse kidney
Data table header descriptions
ID_REF
VALUE
RMA normalized values
Data table
ID_REF
VALUE
1415670_at
10.45886856
1415671_at
11.77308287
1415672_at
12.86244227
1415673_at
10.56291356
1415674_a_at
10.74238899
1415675_at
10.37335078
1415676_a_at
12.65588132
1415677_at
11.23462513
1415678_at
11.19017265
1415679_at
12.37505183
1415680_at
10.10518927
1415681_at
11.24839437
1415682_at
8.545110721
1415683_at
11.55174001
1415684_at
10.35696898
1415685_at
10.60522105
1415686_at
11.25827576
1415687_a_at
12.41759678
1415688_at
11.7763908
1415689_s_at
10.6907628
Total number of rows:
45101
Table truncated, full table size
1026 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM2264779_1-WT.CEL.gz
4.0 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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