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Sample GSM2191139 Query DataSets for GSM2191139
Status Public on Jun 22, 2016
Title ChIP-seq from forebrain (ENCLB375TZU)
Sample type SRA
Source name Mus musculus strain B6NTac;B6NCrl/Lap forebrain tissue mixed sex postnatal (0 days)
Organism Mus musculus
Characteristics antibody: H3K27ac
tissue_type: forebrain
biomaterial_type: tissue
description: Forebrain of pooled postnatal 0 day mice
biosample encode accession: ENCBS554AAA (SAMN04284102)
age: 0 day
donor_id: ENCDO469XMJ
dev stage: postnatal
Sex: pooled male and female
health state: healthy
lab: Len Pennacchio, LBNL
link: ENCBS554AAA at ENCODE;
link: Derived from ENCODE donor ENCDO469XMJ;
link: excision protocol;
Extracted molecule genomic DNA
Extraction protocol general protocol:
general protocol:
general protocol:
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina HiSeq 2500
biological replicate number: 2
technical replicate number: 1
description: H3K27ac ChIP-seq on postnatal 0 day mouse forebrain
experiment encode accession: ENCSR094TTT
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR398NCK
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB375TZU
size range: 300-500
Data processing See GSM*_README.txt supplementary file linked below
Submission date Jun 07, 2016
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL17021
Series (1)
GSE82428 ChIP-seq from forebrain (ENCSR094TTT)
BioSample SAMN04284102
SRA SRX1832945
Named Annotation GSM2191139_ENCFF322DWU_peaks_mm10.bed.gz
Named Annotation GSM2191139_ENCFF761CNL_signal_p-value_mm10.bigWig
Named Annotation GSM2191139_ENCFF838YKO_fold_change_over_control_mm10.bigWig

Supplementary file Size Download File type/resource
GSM2191139_ENCFF322DWU_peaks_mm10.bed.gz 1.2 Mb (ftp)(http) BED
GSM2191139_ENCFF565EDJ_peaks_mm10.bigBed 2.9 Mb (ftp)(http) BIGBED
GSM2191139_ENCFF761CNL_signal_p-value_mm10.bigWig 483.7 Mb (ftp)(http) BIGWIG
GSM2191139_ENCFF838YKO_fold_change_over_control_mm10.bigWig 388.1 Mb (ftp)(http) BIGWIG
GSM2191139_ENCLB375TZU_README.txt.gz 1.1 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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