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GEO accession:
Sample GSM21019
Query DataSets for GSM21019
Status
Public on May 02, 2004
Title
Operon apetala1 set4
Sample type
RNA
Channel 1
Source name
wild-type inflorescences
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Channel 2
Source name
apetala1 inflorescences
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Description
Comparison of gene expression profiles of wild-type and apetala1 inflorescences.
The data were processed and normalized as described in Wellmer et al. (2004) Plant Cell 16(5).
Submission date
Apr 05, 2004
Last update date
May 27, 2005
Contact name
Frank Wellmer
E-mail(s)
wellmer@caltech.edu
Phone
626-395-8438
Organization name
California Institute of Technology
Department
Biology 156-29
Lab
Meyerowitz
Street address
1200 E. California Blvd.
City
Pasadena
State/province
CA
ZIP/Postal code
91125
Country
USA
Platform ID
GPL1077
Series (2)
GSE1270
Operon array expression profile apetala1
GSE1275
Gene expression profiling of Arabidopsis floral homeotic mutants
Data table header descriptions
ID_REF
Intensity1
Absolute intensity measurement for the wild-type sample after background subtraction and normalization
Intensity2
Absolute intensity measurement for the mutant sample after background subtraction and normalization
P-value
Value describing the confidence that the element's expression ratio reflects a change in expression not due to measurement errors
VALUE
log ratio (log2 of PRE_VALUE)
PRE_VALUE
Normalized signal intensity for the mutant sample divided by normalized signal intensity for the wild-type sample
Data table
ID_REF
Intensity1
Intensity2
P-value
VALUE
PRE_VALUE
A000001_01
3.33301
3.57937
0.85086
0.1530143
1.11189
A000002_01
1.98281
1.77722
0.86282
-0.1077883
0.92801
A000003_01
1.62677
1.20299
0.67674
-0.3852623
0.76564
A000004_01
2.98698
3.07783
0.90832
0.0933573
1.06685
A000005_01
1.39183
1.09837
0.74522
-0.2914863
0.81706
A000006_01
7.49742
6.39761
0.60448
-0.1787313
0.88348
A000007_01
0.43232
0.5023
0.80192
0.2665653
1.20294
A000008_01
0.02759
0.01861
0.48068
-0.5175653
0.69855
A000009_01
0.07438
0.03123
0.06921
-1.2016093
0.43479
A000010_01
0.46707
0.24486
0.15877
-0.8815343
0.54279
A000011_01
0.18108
0.20707
0.71858
0.2435963
1.18394
A000012_01
1.32253
1.48711
0.69706
0.2193393
1.1642
A000013_01
0.63157
0.66839
0.81206
0.1318663
1.09571
A000014_01
0.08157
0.08938
0.75699
0.1821333
1.13456
A000015_01
1.06092
0.94626
0.84009
-0.1148793
0.92346
A000016_01
2.12777
2.40829
0.67246
0.2288003
1.17186
A000017_01
3.38974
3.08523
0.82374
-0.0856653
0.94235
A000018_01
0.01389
0.00851
0.40713
-0.6573773
0.63403
A000019_01
0.14807
0.07854
0.03207
-0.8645703
0.54921
A000020_01
1.39622
1.39832
0.88198
0.0522913
1.03691
Total number of rows:
26933
Table truncated, full table size
1381 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM21019.GPR.gz
1.9 Mb
(ftp)
(http)
GPR
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