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GEO accession:
Sample GSM21008
Query DataSets for GSM21008
Status
Public on May 02, 2004
Title
cDNA apetala3 set2
Sample type
RNA
Channel 1
Source name
wild-type inflorescences
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Channel 2
Source name
apetala3 inflorescences
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Description
Comparison of gene expression profiles of wild-type and apetala3 inflorescences.
The data were preprocessed and normalized as described in Wellmer et al. (2004) Plant Cell 16(5).
Submission date
Apr 04, 2004
Last update date
May 27, 2005
Contact name
Frank Wellmer
E-mail(s)
wellmer@caltech.edu
Phone
626-395-8438
Organization name
California Institute of Technology
Department
Biology 156-29
Lab
Meyerowitz
Street address
1200 E. California Blvd.
City
Pasadena
State/province
CA
ZIP/Postal code
91125
Country
USA
Platform ID
GPL1069
Series (2)
GSE1267
cDNA array expression profile apetala3
GSE1275
Gene expression profiling of Arabidopsis floral homeotic mutants
Data table header descriptions
ID_REF
WT_set2
Normalized signal intensity for the wild type sample
ap3_set2
Normalized signal intensity for the mutant sample
VALUE
log ratio (log2 of PRE_VALUE)
PRE_VALUE
Ratio: mutant/wild type
Data table
ID_REF
WT_set2
ap3_set2
VALUE
PRE_VALUE
GP000E3
0.021365026
0.019900707
-0.1024313
0.931461892
GP000A4
0.036809475
0.052971566
0.5251413
1.439074214
GP000C3
0.038465252
0.039478463
0.0375103
1.026340948
GP000E1
0.047453737
0.041419645
-0.1962073
0.872842632
GP005G8
0.026278609
0.03347354
0.3491323
1.273794193
GP137G9
0.038273405
0.059130997
0.6275723
1.544963059
GP002H3
0.068906828
0.068221194
-0.0144273
0.990049834
GP001D8
0.06117602
0.050186962
-0.2856543
0.820369853
GP002E1
0.039439004
0.055576213
0.4948443
1.409168762
GP000D2
0.045049202
0.044113033
-0.0302973
0.979218965
GP000F4
0.031872873
0.042681061
0.4212673
1.339103018
GP004H4
0.048655034
0.065284542
0.4241523
1.341783904
GP035F12
0.038082516
0.034527471
-0.1413843
0.906648904
GP000A2
0.046607211
0.040115199
-0.2164043
0.860707976
GP033A1
0.032257652
0.037179416
0.2048633
1.152576649
GP042E1
0.051354639
0.041835919
-0.2957523
0.814647316
GP004E3
0.043936934
0.045821585
0.0605933
1.042894479
GP010F1
0.033877642
0.031713907
-0.0952183
0.936130864
GP000H2
0.046794014
0.050337749
0.1053173
1.075730537
GP010H6
0.039399585
0.039203079
-0.0072133
0.995012479
Total number of rows:
9019
Table truncated, full table size
480 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM21008.GPR.gz
832.4 Kb
(ftp)
(http)
GPR
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