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GEO accession:
Sample GSM21002
Query DataSets for GSM21002
Status
Public on May 02, 2004
Title
cDNA apetala1 set2
Sample type
RNA
Channel 1
Source name
wild type inflorescences
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Channel 2
Source name
apetala1 inflorescences
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Description
Comparison of gene expression profiles of wild-type and apetala1 inflorescences.
The data were preprocessed and normalized as described in Wellmer et al. (2004) Plant Cell 16(5).
Submission date
Apr 04, 2004
Last update date
May 27, 2005
Contact name
Frank Wellmer
E-mail(s)
wellmer@caltech.edu
Phone
626-395-8438
Organization name
California Institute of Technology
Department
Biology 156-29
Lab
Meyerowitz
Street address
1200 E. California Blvd.
City
Pasadena
State/province
CA
ZIP/Postal code
91125
Country
USA
Platform ID
GPL1069
Series (2)
GSE1265
cDNA array expression profile apetala1
GSE1275
Gene expression profiling of Arabidopsis floral homeotic mutants
Data table header descriptions
ID_REF
WT_set2
Normalized signal intensity for the wild type sample
ap1_set2
Normalized signal intensity for the mutant sample
VALUE
log ratio (log2 of PRE_VALUE)
PRE_VALUE
Ratio: mutant/wild type
Data table
ID_REF
WT_set2
ap1_set2
VALUE
PRE_VALUE
GP000A1
0.081268239
0.063355092
-0.3592313
0.779579973
GP000A2
0.038196935
0.035543428
-0.1038743
0.930530896
GP000A3
0.145729954
0.054312548
-1.4239403
0.372693095
GP000A4
0.036443214
0.042510677
0.2221753
1.166490887
GP000B1
0.031650542
0.033674985
0.0894473
1.063962345
GP000B3
0.030807411
0.032032637
0.0562653
1.039770484
GP000C1
0.036809475
0.032745164
-0.1687953
0.889585193
GP000C2
0.068769152
0.047169867
-0.5438963
0.685916074
GP000C3
0.02998674
0.031682209
0.0793483
1.056540615
GP000C4
1.236395139
0.245367056
-2.3331263
0.198453592
GP000D1
0.021046942
0.021386402
0.0230833
1.016128685
GP000D2
0.030227596
0.032975184
0.1255143
1.09089668
GP000D3
0.195147421
0.201896518
0.0490523
1.034584607
GP000D4
0.420210291
0.310366941
-0.4371373
0.738599096
GP000E1
0.035900646
0.048898918
0.4457933
1.362062371
GP000E2
0.034631209
0.033877642
-0.0317393
0.978240235
GP000E3
0.017404961
0.020692168
0.2495863
1.188866105
GP000E4
0.124930212
0.058308931
-1.0993343
0.466732029
GP000F1
0.59851721
0.65902092
0.1389323
1.101089341
GP000F2
0.457169984
0.296117187
-0.6265623
0.647717911
Total number of rows:
9413
Table truncated, full table size
499 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM21002.GPR.gz
803.4 Kb
(ftp)
(http)
GPR
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