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GEO accession:
Sample GSM21001
Query DataSets for GSM21001
Status
Public on May 02, 2004
Title
cDNA apetala1 set1
Sample type
RNA
Channel 1
Source name
wild type inflorescences
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Channel 2
Source name
apetala1 inflorescences
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Description
Comparison of gene expression profiles of wild-type and apetala1 inflorescences.
The data were preprocessed and normalized as described in Wellmer et al. (2004) Plant Cell 16(5).
Submission date
Apr 03, 2004
Last update date
May 27, 2005
Contact name
Frank Wellmer
E-mail(s)
wellmer@caltech.edu
Phone
626-395-8438
Organization name
California Institute of Technology
Department
Biology 156-29
Lab
Meyerowitz
Street address
1200 E. California Blvd.
City
Pasadena
State/province
CA
ZIP/Postal code
91125
Country
USA
Platform ID
GPL1069
Series (2)
GSE1265
cDNA array expression profile apetala1
GSE1275
Gene expression profiling of Arabidopsis floral homeotic mutants
Data table header descriptions
ID_REF
WT_set1
Normalized signal intensity for the wild type sample
ap1_set1
Normalized signal intensity for the mutant sample
VALUE
log ratio (log2 of PRE_VALUE)
PRE_VALUE
Ratio: mutant/wild type
Data table
ID_REF
WT_set1
ap1_set1
VALUE
PRE_VALUE
GP000A1
0.0462821
0.041007512
-0.1745663
0.88603396
GP000A2
0.040477865
0.028015426
-0.5309123
0.692117182
GP000A3
0.203518168
0.085863195
-1.2450463
0.421894498
GP000A4
0.01912039
0.0284104
0.5713073
1.485869318
GP000B1
0.026916925
0.038120618
0.5020583
1.41623225
GP000B3
0.020363728
0.03281072
0.6881663
1.611233444
GP000C1
0.032128879
0.029807358
-0.1082023
0.927743486
GP000C2
0.069948222
0.057326058
-0.2870963
0.819549893
GP000C3
0.02404087
0.022214723
-0.1139733
0.924039924
GP000C4
1.349318972
0.642107207
-1.0713453
0.475875031
GP000D1
0.022868382
0.01929325
-0.2452583
0.843664817
GP000D2
0.025451006
0.02557858
0.0072133
1.005012521
GP000D3
0.060567308
0.080298848
0.4068403
1.32577872
GP000D4
0.266335097
0.418574662
0.6522423
1.571609102
GP000E1
0.028071513
0.044914257
0.6780673
1.599994193
GP000E2
0.034700541
0.03320682
-0.0634793
0.956953957
GP000E3
0.014037822
0.016941314
0.2712273
1.206833515
GP000E4
0.049637931
0.060265227
0.2798833
1.214096283
GP000F1
0.533658051
0.702225993
0.3960203
1.315872574
GP000F2
0.351691819
0.286504797
-0.2957523
0.814647316
Total number of rows:
9413
Table truncated, full table size
500 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM21001.GPR.gz
798.3 Kb
(ftp)
(http)
GPR
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