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Sample GSM19231 Query DataSets for GSM19231
Status Public on Mar 28, 2004
Title Mouse Liver Male 3
Sample type RNA
 
Source name Mouse Liver
Organism Mus musculus
Extracted molecule total RNA
 
Description Triple selected polyA RNA for liver, kidney, ovary,
testis, was obtained from Ambion (Austin, TX). Total
RNA was obtained form Ambion for hypothalamus samples.
All RNA samples had an agilent ratio greater
than 1 indicating that degradation had not occurred.
All RNA samples were prepared from a pool of 10
different animals. The total RNA samples were
labeled for hybridization onto the microarray according
to affymetrix protocols listed at:
http://keck.med.yale.edu/affymetrix/protocols
Keywords = Sex Specific Transcription, Mouse, Affymetrix, Healthy Mammalian Tissue
 
Submission date Mar 26, 2004
Last update date May 27, 2005
Contact name Joel Rozowsky
E-mail(s) rozowsky@csb.yale.edu
Phone 203-432-5405
Organization name Yale University
Department Molecular Biophysics & Biochemistry
Lab Gerstein Lab
Street address 266 Whitney Ave, Bass 437
City New Haven
State/province CT
ZIP/Postal code 06520
Country USA
 
Platform ID GPL339
Series (1)
GSE1148 Sex Specific Transciption in Mouse Tissues

Data table header descriptions
ID_REF
VALUE MAS 5.0 Intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 171.2 P 0.012547
AFFX-BioB-M_at 392.7 P 0.001796
AFFX-BioB-3_at 214.9 P 0.005565
AFFX-BioC-5_at 711.1 P 0.000110
AFFX-BioC-3_at 424.0 P 0.000052
AFFX-BioDn-5_at 651.1 P 0.000095
AFFX-BioDn-3_at 3795.2 P 0.000147
AFFX-CreX-5_at 6317.5 P 0.000044
AFFX-CreX-3_at 11794.8 P 0.000044
AFFX-DapX-5_at 8.0 A 0.440646
AFFX-DapX-M_at 30.0 A 0.205732
AFFX-DapX-3_at 4.2 A 0.945787
AFFX-LysX-5_at 8.3 A 0.313723
AFFX-LysX-M_at 13.5 A 0.699394
AFFX-LysX-3_at 11.9 A 0.275076
AFFX-PheX-5_at 2.5 A 0.921998
AFFX-PheX-M_at 4.4 A 0.891021
AFFX-PheX-3_at 18.9 A 0.603080
AFFX-ThrX-5_at 13.1 A 0.411373
AFFX-ThrX-M_at 31.8 A 0.327079

Total number of rows: 22690

Table truncated, full table size 628 Kbytes.




Supplementary data files not provided

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