NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM190555 Query DataSets for GSM190555
Status Public on Jul 27, 2009
Title Fat CD4 Treg cells, repl. 1
Sample type RNA
 
Source name adipose Treg cells
Organism Mus musculus
Characteristics Male C57Bl/6 (retired breeders 25-35 weeks old) purchased from the Jackson Laboratory. Abdominal (epidydimal) adipose tissue was cut into small pieces and digested for about 40 minutes with collagease type II. Cell suspensions were then filtered through a sieve and stromovascular fraction (SVF) was harvested after spinning.
Genetic background: Male C57Bl/6;
Age: 25-35 weeks old;
Number of mice per chip: 8-10;
Tissue: Abdominal (epidydimal) adipose tissue;
Sorting: B220-, CD11b-, CD8a-, CD4+, TCRb+, CD25+
Extracted molecule total RNA
Extraction protocol RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label Biotin
Label protocol BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
 
Hybridization protocol Per Joslin Diabetes Center microarray core facility.
Scan protocol Per Joslin Diabetes Center microarray core facility.
Description jos3641.CEL
Data processing RMA
 
Submission date May 18, 2007
Last update date Aug 28, 2018
Contact name CBDM Lab
E-mail(s) cbdm@hms.harvard.edu
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL1261
Series (1)
GSE7852 Fat Treg cells
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA-unlogged

Data table
ID_REF VALUE
1415670_at 169.5233038
1415671_at 754.5561229
1415672_at 2396.864121
1415673_at 165.2990386
1415674_a_at 313.3418835
1415675_at 297.8282927
1415676_a_at 862.6812409
1415677_at 157.8311232
1415678_at 1458.923564
1415679_at 3676.61701
1415680_at 271.645593
1415681_at 284.9432724
1415682_at 186.9559174
1415683_at 1270.904418
1415684_at 160.5201779
1415685_at 183.5361015
1415686_at 1708.672512
1415687_a_at 2087.529876
1415688_at 2317.745927
1415689_s_at 232.5076822

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.




Supplementary file Size Download File type/resource
GSM190555.CEL.gz 3.6 Mb (ftp)(http) CEL

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap