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Sample GSM175974 Query DataSets for GSM175974
Status Public on Apr 09, 2007
Title Bone Marrow 1 Normal
Sample type RNA
 
Source name Male/Female; Normal/Diseased
Organism Homo sapiens
Characteristics Tissue/Cell Line [C]: bone_marrow
Disease/Normal or Treatment [C]: normal
Gender: M
Disease type: Normal
Treatment protocol Not treated
Growth protocol None
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, cRNA were hybridized for 16 hr at 45C on the GeneChip Human U133 plus 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000
Description Normal
Data processing The data were analyzed with robust multi-array (RMA) for background correction, normalization and polishing.
 
Submission date Mar 19, 2007
Last update date Aug 28, 2018
Contact name Richard B Roth
E-mail(s) rroth@neurocrine.com
Organization name Neurocrine Biosciences, Inc.
Department Molecular Medicine
Street address 12790 El Camino Real
City San Diego
State/province CA
ZIP/Postal code 92130
Country USA
 
Platform ID GPL570
Series (1)
GSE7307 Human body index - transcriptional profiling
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE RMA-calculated Signal intensity

Data table
ID_REF VALUE
1554096_a_at 7.758485
235618_at 14.91928
226481_at 69.43128
203075_at 39.615955
236658_at 7.625479
212621_at 67.66654
1557720_s_at 4.8838844
242882_at 11.739618
238622_at 4.3684225
1566288_at 1.6284728
223862_at 17.953869
227982_at 14.349931
235483_at 23.795887
1566114_at 1.5270512
204150_at 43.81865
201484_at 73.47277
212061_at 23.813501
210092_at 44.268044
205145_s_at 14.103588
221594_at 5.8142934

Total number of rows: 54675

Table truncated, full table size 1095 Kbytes.




Supplementary file Size Download File type/resource
GSM175974.CEL.gz 7.0 Mb (ftp)(http) CEL

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