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Sample GSM173089 Query DataSets for GSM173089
Status Public on Apr 04, 2007
Title Rice MH63 Control3
Sample type RNA
 
Source name Rice MH63 Control3
Organism Oryza sativa
Characteristics Age:11 days
Extracted molecule total RNA
Extraction protocol RNA was extracted using TRIzol (Invitrogen, Carlsbad, CA, USA) as described by the manufacturer.
Label biotin
Label protocol standard Affymetrix procedures
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Rice MH63 Control
Data processing GCOS 1.2
 
Submission date Mar 06, 2007
Last update date Apr 04, 2007
Contact name Qianwen Sun
E-mail(s) sunqianwen@webmail.hzau.edu.cn
Phone 862787281800
URL http://redb.ncpgr.cn/
Organization name Huazhong Agriculture University
Department National Key Laboratory of Crop Genetic Improvement
Lab Gene Center
Street address Luoshi Road
City Wuhan
State/province Hubei
ZIP/Postal code 430070
Country China
 
Platform ID GPL2025
Series (1)
GSE7197 Down-regulation of OsSRT1 induces DNA ´╗┐fragmentation and cell death in rice

Data table header descriptions
ID_REF
VALUE GCOS 1.2
ABS_CALL Rice-CK3
DETECTION P-VALUE Rice-CK3

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 378.775 P 7.00668e-05
AFFX-BioB-M_at 548.7 P 5.16732e-05
AFFX-BioB-3_at 660.82 P 4.42873e-05
AFFX-BioC-5_at 1367.66 P 4.42873e-05
AFFX-BioC-3_at 1325.14 P 5.16732e-05
AFFX-BioDn-5_at 2519.09 P 4.42873e-05
AFFX-BioDn-3_at 6019.73 P 4.42873e-05
AFFX-CreX-5_at 17181.9 P 4.42873e-05
AFFX-CreX-3_at 24334.3 P 4.42873e-05
AFFX-DapX-5_at 477.475 P 6.02111e-05
AFFX-DapX-M_at 1635.5 P 6.02111e-05
AFFX-DapX-3_at 3982.25 P 4.42873e-05
AFFX-LysX-5_at 131.732 P 0.000146581
AFFX-LysX-M_at 295.699 P 0.000126798
AFFX-LysX-3_at 585.11 P 9.4506e-05
AFFX-PheX-5_at 304.311 P 7.00668e-05
AFFX-PheX-M_at 276.143 P 0.000195116
AFFX-PheX-3_at 471.408 P 5.16732e-05
AFFX-ThrX-5_at 151.654 P 5.16732e-05
AFFX-ThrX-M_at 502.776 P 4.42873e-05

Total number of rows: 57381

Table truncated, full table size 2170 Kbytes.




Supplementary file Size Download File type/resource
GSM173089.CEL.gz 4.4 Mb (ftp)(http) CEL
GSM173089.EXP.gz 503 b (ftp)(http) EXP
GSM173089.jpg.gz 134.1 Kb (ftp)(http) JPG
Raw data provided as supplementary file

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