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GEO accession:
Sample GSM173089
Query DataSets for GSM173089
Status
Public on Apr 04, 2007
Title
Rice MH63 Control3
Sample type
RNA
Source name
Rice MH63 Control3
Organism
Oryza sativa
Characteristics
Age:11 days
Extracted molecule
total RNA
Extraction protocol
RNA was extracted using TRIzol (Invitrogen, Carlsbad, CA, USA) as described by the manufacturer.
Label
biotin
Label protocol
standard Affymetrix procedures
Hybridization protocol
standard Affymetrix procedures
Scan protocol
standard Affymetrix procedures
Description
Rice MH63 Control
Data processing
GCOS 1.2
Submission date
Mar 06, 2007
Last update date
Apr 04, 2007
Contact name
Qianwen Sun
E-mail(s)
sunqianwen@webmail.hzau.edu.cn
Phone
862787281800
URL
http://redb.ncpgr.cn/
Organization name
Huazhong Agriculture University
Department
National Key Laboratory of Crop Genetic Improvement
Lab
Gene Center
Street address
Luoshi Road
City
Wuhan
State/province
Hubei
ZIP/Postal code
430070
Country
China
Platform ID
GPL2025
Series (1)
GSE7197
Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
Data table header descriptions
ID_REF
VALUE
GCOS 1.2
ABS_CALL
Rice-CK3
DETECTION P-VALUE
Rice-CK3
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
378.775
P
7.00668e-05
AFFX-BioB-M_at
548.7
P
5.16732e-05
AFFX-BioB-3_at
660.82
P
4.42873e-05
AFFX-BioC-5_at
1367.66
P
4.42873e-05
AFFX-BioC-3_at
1325.14
P
5.16732e-05
AFFX-BioDn-5_at
2519.09
P
4.42873e-05
AFFX-BioDn-3_at
6019.73
P
4.42873e-05
AFFX-CreX-5_at
17181.9
P
4.42873e-05
AFFX-CreX-3_at
24334.3
P
4.42873e-05
AFFX-DapX-5_at
477.475
P
6.02111e-05
AFFX-DapX-M_at
1635.5
P
6.02111e-05
AFFX-DapX-3_at
3982.25
P
4.42873e-05
AFFX-LysX-5_at
131.732
P
0.000146581
AFFX-LysX-M_at
295.699
P
0.000126798
AFFX-LysX-3_at
585.11
P
9.4506e-05
AFFX-PheX-5_at
304.311
P
7.00668e-05
AFFX-PheX-M_at
276.143
P
0.000195116
AFFX-PheX-3_at
471.408
P
5.16732e-05
AFFX-ThrX-5_at
151.654
P
5.16732e-05
AFFX-ThrX-M_at
502.776
P
4.42873e-05
Total number of rows:
57381
Table truncated, full table size
2170 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM173089.CEL.gz
4.4 Mb
(ftp)
(http)
CEL
GSM173089.EXP.gz
503 b
(ftp)
(http)
EXP
GSM173089.jpg.gz
134.1 Kb
(ftp)
(http)
JPG
Raw data provided as supplementary file
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