|
Status |
Public on Apr 23, 2015 |
Title |
DC HER2 tumor at T3, biological replicate 2 |
Sample type |
RNA |
|
|
Source name |
tumor material
|
Organism |
Mus musculus |
Characteristics |
tissue: tumor strain: C57BL/6 dc gene: HER2 cachexia status: no cachexia
|
Extracted molecule |
total RNA |
Extraction protocol |
Total RNA extracted using Qiagen Rneasy Kit following manufacturer's protocol
|
Label |
biotin
|
Label protocol |
Biotinylated cRNA were prepared according to the standard Affymetrix protocol
|
|
|
Hybridization protocol |
Standard Affymetrix hybridization protocol
|
Scan protocol |
Arrays were scanned using the Affymetrix GeneChip Scanner 3000
|
Description |
Gene expression data from tumor generated by DC mouse model
|
Data processing |
The data were analyzed using the affy package from Bioconductor 3.0
|
|
|
Submission date |
Apr 22, 2015 |
Last update date |
Apr 23, 2015 |
Contact name |
Lorena Lerner |
Organization name |
AVEO Oncology
|
Street address |
650 E. Kendall Street
|
City |
Cambridge |
State/province |
MA |
ZIP/Postal code |
02142 |
Country |
USA |
|
|
Platform ID |
GPL1261 |
Series (1) |
GSE68162 |
Expression data from MAP3K11/GDF15 axis is a critical driver of cancer cachexia |
|