 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Apr 13, 2015 |
| Title |
Celf1-130nM_Mbnl1-250nM |
| Sample type |
SRA |
| |
|
| Source name |
in vitro library of RNA, pulled down with 130 nM CELF1 protein in the presence of 250 nM MBNL1 protein.
|
| Organism |
synthetic construct |
| Characteristics |
treatment: Celf1-130nM_Mbnl1-250nM
|
| Extracted molecule |
total RNA |
| Extraction protocol |
in vitro library
|
| |
|
| Library strategy |
OTHER |
| Library source |
transcriptomic |
| Library selection |
other |
| Instrument model |
Illumina HiSeq 2000 |
| |
|
| Data processing |
Reads were analyzed for motif enrichment according to Lambert et al, Mol Cell 2014.
Genome_build: n/a
Supplementary_files_format_and_content: Excel file of hexamer R values for each library.
|
| |
|
| Submission date |
Mar 26, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Eric T Wang |
| Organization name |
University of Florida
|
| Street address |
2033 Mowry Rd
|
| City |
Gainesville |
| State/province |
FL |
| ZIP/Postal code |
32610 |
| Country |
USA |
| |
|
| Platform ID |
GPL15228 |
| Series (2) |
| GSE61893 |
Functional Antagonism Between CELF and Mbnl Proteins in Cytoplasm and Nucleus |
| GSE67337 |
Functional Antagonism Between CELF and Mbnl Proteins in Cytoplasm and Nucleus [RNA Bind-N-Seq] |
|
| Relations |
| BioSample |
SAMN03448760 |
| SRA |
SRX970704 |
| Supplementary data files not provided |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
|
|
|
|
 |
