|
| Status |
Public on Sep 02, 2015 |
| Title |
MDT-EP40.Primary-Spinal |
| Sample type |
RNA |
| |
|
| Source name |
Primary Spinal Ependymoma
|
| Organism |
Homo sapiens |
| Characteristics |
gender: male
age (yrs): 7
molecular subgroup: MPE
histological grade: 1
tissue: Spinal Cord
tissue subtype: Primary Spinal Ependymoma
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted using the Trizol Method [PMID:21840481]
|
| Label |
biotin
|
| Label protocol |
According to manufacturers recommendations
|
| |
|
| Hybridization protocol |
According to manufacturers recommendations
|
| Scan protocol |
According to manufacturers recommendations
|
| Description |
GeneArray1-1_MDT-EP40.rma-gene-default-Signal
|
| Data processing |
Data was processed using Affymetrix Expression Console further analysis was performed in R(v.3.0)/Bioconductor(v.2.14) [PMID:21840481]
Data in the processed matrix has been processed using the RMA algorithm according to methods published previously [PMID:21840481]
|
| |
|
| Submission date |
Mar 11, 2015 |
| Last update date |
Sep 02, 2015 |
| Contact name |
Stephen Mack Christopher |
| E-mail(s) |
stevemack.work@gmail.com
|
| Phone |
2163182292
|
| Organization name |
Baylor College of Medicine
|
| Department |
Pediatrics
|
| Lab |
Stephen Mack Lab
|
| Street address |
1102 Bates Avenue C1030.02
|
| City |
Houston |
| State/province |
TX |
| ZIP/Postal code |
770030 |
| Country |
USA |
| |
|
| Platform ID |
GPL11532 |
| Series (1) |
| GSE66787 |
Spinal Ependymoma Gene Expression Data |
|
