NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1587298 Query DataSets for GSM1587298
Status Public on Jan 01, 2016
Title AFO f/f white fat, biological rep2
Sample type RNA
 
Source name Adiponectin cre FTO flox/flox mouse white fat
Organism Mus musculus
Characteristics strain: C57BL/6
gender: Male
tissue: Visceral white fat
genotype/variation: Adiponectin-cre FTO flox/flox
diet: Chow diet
age: 16 weeks
Treatment protocol White fat tissues were harvested under random fed condition.
Extracted molecule total RNA
Extraction protocol Tri Reagent extraction of total RNA was performed according to the Ambion's instruction
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the Affymetrix GeneChip 3' IVT Express kit protocol
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Description Gene expression data from Adiponectin cre + FTO flox/flox gonadal white fat, pool 2
Data processing Normalize with RMA by Affymetrix Expression Console Ver 1.4
 
Submission date Jan 20, 2015
Last update date Jan 01, 2016
Contact name Chao-Yung Wang
E-mail(s) cwang@ocean.ag
Organization name Chang Gung Memorial Hospital
Department Cardiology
Lab OCEAN
Street address 5 Fu-Hsing street
City Taoyuan
ZIP/Postal code 333
Country Taiwan
 
Platform ID GPL1261
Series (1)
GSE65098 Adiponectin-cre FTO flox/flox and FTO flox/flox mouse white fat tissues

Data table header descriptions
ID_REF
VALUE Quantification

Data table
ID_REF VALUE
AFFX-BioB-5_at 7.89391
AFFX-BioB-M_at 8.75096
AFFX-BioB-3_at 8.24048
AFFX-BioC-5_at 9.46523
AFFX-BioC-3_at 10.1743
AFFX-BioDn-5_at 10.5373
AFFX-BioDn-3_at 11.618
AFFX-CreX-5_at 12.9098
AFFX-CreX-3_at 13.2099
AFFX-DapX-5_at 2.70651
AFFX-DapX-M_at 2.38412
AFFX-DapX-3_at 2.48597
AFFX-LysX-5_at 2.14145
AFFX-LysX-M_at 2.67394
AFFX-LysX-3_at 2.25255
AFFX-PheX-5_at 2.73762
AFFX-PheX-M_at 2.61406
AFFX-PheX-3_at 4.5547
AFFX-ThrX-5_at 3.07023
AFFX-ThrX-M_at 2.56461

Total number of rows: 45101

Table truncated, full table size 850 Kbytes.




Supplementary file Size Download File type/resource
GSM1587298_AFO_WF2.CEL.gz 3.5 Mb (ftp)(http) CEL
GSM1587298_AFO_WF2.RMA.CHP.gz 311.0 Kb (ftp)(http) CHP
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap