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Sample GSM1587297 Query DataSets for GSM1587297
Status Public on Jan 01, 2016
Title AFO f/f white fat, biological rep1
Sample type RNA
 
Source name Adiponectin cre FTO flox/flox mouse white fat
Organism Mus musculus
Characteristics strain: C57BL/6
gender: Male
tissue: Visceral white fat
genotype/variation: Adiponectin-cre FTO flox/flox
diet: Chow diet
age: 16 weeks
Treatment protocol White fat tissues were harvested under random fed condition.
Extracted molecule total RNA
Extraction protocol Tri Reagent extraction of total RNA was performed according to the Ambion's instruction
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the Affymetrix GeneChip 3' IVT Express kit protocol
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Description Gene expression data from Adiponectin cre + FTO flox/flox gonadal white fat, pool 1
Data processing Normalize with RMA by Affymetrix Expression Console Ver 1.4
 
Submission date Jan 20, 2015
Last update date Jan 01, 2016
Contact name Chao-Yung Wang
E-mail(s) cwang@ocean.ag
Organization name Chang Gung Memorial Hospital
Department Cardiology
Lab OCEAN
Street address 5 Fu-Hsing street
City Taoyuan
ZIP/Postal code 333
Country Taiwan
 
Platform ID GPL1261
Series (1)
GSE65098 Adiponectin-cre FTO flox/flox and FTO flox/flox mouse white fat tissues

Data table header descriptions
ID_REF
VALUE Quantification

Data table
ID_REF VALUE
AFFX-BioB-5_at 7.2801
AFFX-BioB-M_at 7.98151
AFFX-BioB-3_at 7.51396
AFFX-BioC-5_at 8.72148
AFFX-BioC-3_at 9.45028
AFFX-BioDn-5_at 9.75792
AFFX-BioDn-3_at 10.9395
AFFX-CreX-5_at 12.5498
AFFX-CreX-3_at 12.7956
AFFX-DapX-5_at 2.65685
AFFX-DapX-M_at 2.35826
AFFX-DapX-3_at 2.35916
AFFX-LysX-5_at 2.22328
AFFX-LysX-M_at 2.56903
AFFX-LysX-3_at 2.28235
AFFX-PheX-5_at 2.66921
AFFX-PheX-M_at 2.57439
AFFX-PheX-3_at 4.71013
AFFX-ThrX-5_at 3.03236
AFFX-ThrX-M_at 2.46901

Total number of rows: 45101

Table truncated, full table size 849 Kbytes.




Supplementary file Size Download File type/resource
GSM1587297_AFO_WF1.CEL.gz 3.3 Mb (ftp)(http) CEL
GSM1587297_AFO_WF1.RMA.CHP.gz 311.3 Kb (ftp)(http) CHP
Processed data included within Sample table

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