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Sample GSM1431427 Query DataSets for GSM1431427
Status Public on Jul 10, 2014
Title SLE11586.CD14
Sample type genomic
 
Source name CD14+ Monocytes
Organism Homo sapiens
Characteristics cell type: CD14+ Monocytes
disease state: Systemic Lupus Erythematosus
sentrix.barcode: 6190781002
sentrix.position: R03C01
Treatment protocol NA
Growth protocol NA
Extracted molecule genomic DNA
Extraction protocol QIAGEN DNAeasy; Zymo EZ DNA
Label Cy3,Cy5
Label protocol Standard Illumina Protocol
 
Hybridization protocol Standard Illumina Protocol
Scan protocol Standard Illumina Protocol
Description Illumina HumanMethylation450
Data processing Illumina Genome Studio
Unmethylated (A) and methylated (B) signal intensities
 
Submission date Jul 09, 2014
Last update date Jul 10, 2014
Contact name Devin Absher
E-mail(s) dabsher@hudsonalpha.org
Organization name HudsonAlpha Institute for Biotechnology
Street address 601 Genome Way
City Huntsville
State/province AL
ZIP/Postal code 35806
Country USA
 
Platform ID GPL13534
Series (1)
GSE59250 DNA Methylation Analysis of Systemic Lupus Erythematosus

Data table header descriptions
ID_REF
VALUE average beta
Detection Pval

Data table
ID_REF VALUE Detection Pval
cg00000029 0.6590301 0
cg00000108 0.9686663 0
cg00000109 0.9281757 0
cg00000165 0.2819757 0
cg00000236 0.811346 0
cg00000289 0.6073781 0
cg00000292 0.8989335 0
cg00000321 0.3573125 0
cg00000363 0.510835 0
cg00000622 0.01356181 0
cg00000658 0.8936799 0
cg00000714 0.2239382 0
cg00000721 0.952436 0
cg00000734 0.107605 0
cg00000769 0.03478261 0
cg00000807 0.9158469 0
cg00000884 0.9108196 0
cg00000905 0.08358372 0
cg00000924 0.7034063 0
cg00000948 0.90089 0

Total number of rows: 485577

Table truncated, full table size 10995 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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