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Sample GSM1421508 Query DataSets for GSM1421508
Status Public on Dec 19, 2014
Title Human Fetal Brain (8963311115_R04C02)
Sample type genomic
 
Source name Brain
Organism Homo sapiens
Characteristics days post-conception: 87
gender: F
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was extracted and purified from brain samples using a standard phenol/chloroform extraction
Label biotin
Label protocol Standard Illumina 450K Protocol
 
Hybridization protocol Standard Illumina 450K Protocol
Scan protocol Standard Illumina Protocol
Description 8963311115_R04C02
Data processing Genome Studio followed by WateRmelon. Normalized beta values generated via the Dasen method of the WateRmelon package.
 
Submission date Jun 27, 2014
Last update date Feb 05, 2015
Contact name Jon Mill
Organization name King's College London
Department Institute of Psychiatry
Lab MRC SGDP Centre
Street address De Crespigny Park
City London
ZIP/Postal code SE5 8AF
Country United Kingdom
 
Platform ID GPL13534
Series (1)
GSE58885 Methylomic trajectories across human fetal brain development

Data table header descriptions
ID_REF
VALUE normalized beta value
Detection P value

Data table
ID_REF VALUE Detection P value
cg00000029 0.736063783350197 0
cg00000108 0.89200411365268 0
cg00000109 0.698228412324675 0
cg00000165 0.355857876733584 0
cg00000236 0.711763057342256 0
cg00000289 0.434656454184127 0
cg00000292 0.774345211548376 0
cg00000321 0.43217600703918 0
cg00000363 0.123819016604982 0
cg00000622 0.0636952923240955 0
cg00000658 0.808979532059835 0
cg00000714 0.139763092117179 0
cg00000721 0.820687734067907 0
cg00000734 0.113216157945485 0
cg00000769 0.110891415156811 0
cg00000807 0.834833333114937 0
cg00000884 0.77753368366286 0
cg00000905 0.219010357862815 0
cg00000924 0.556351036958766 0
cg00000948 0.903802540482254 0

Total number of rows: 485577

Table truncated, full table size 13372 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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