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Sample GSM137702 Query DataSets for GSM137702
Status Public on Feb 20, 2007
Title 2000209T
Sample type genomic
 
Source name Breast Tumor
Organism Homo sapiens
Characteristics Tissue: Breast
Extracted molecule genomic DNA
Extraction protocol Qiagen DNA extraction kit was used according to the manufacturer's instructions.
Label biotinylated dideoxy ATP
Label protocol biotinylated dideoxy ATP is terminal deoxynucleotidyl transferased
 
Hybridization protocol Following Manufactruer's protocol
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner GCS3000
Description SNP profiling for breast tumors
Data processing The data were analyzed Dchip software for normalization and expression estimation
 
Submission date Sep 28, 2006
Last update date Feb 20, 2007
Contact name wei chen
E-mail(s) chenwei@agenica.com
Organization name Agenica Research Pte Ltd
Street address 11 Hospital Drive
City Singapore
ZIP/Postal code 169610
Country Singapore
 
Platform ID GPL2005
Series (1)
GSE5927 SNP expression data from breast cancer

Data table header descriptions
ID_REF
VALUE Dchip generated Signal intensity

Data table
ID_REF VALUE
SNP_A-1650338 3838.46
SNP_A-1716667 9205.46
SNP_A-1712945 9852.74
SNP_A-1711654 6274.29
SNP_A-1717655 5177.96
SNP_A-1659842 5337.85
SNP_A-1653742 1841.21
SNP_A-1686138 427.814
SNP_A-1696456 2604.74
SNP_A-1706789 542.225
SNP_A-1702159 15798.3
SNP_A-1717099 733.526
SNP_A-1692956 895.237
SNP_A-1693565 1272.16
SNP_A-1731109 16971
SNP_A-1642331 11776.3
SNP_A-1713287 6229.61
SNP_A-1749711 28498.9
SNP_A-1755148 9095.96
SNP_A-1741069 5920.03

Total number of rows: 58960

Table truncated, full table size 1259 Kbytes.




Supplementary data files not provided

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