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GEO accession:
Sample GSM131498
Query DataSets for GSM131498
Status
Public on Jan 08, 2007
Title
ATGE_5_A
Sample type
RNA
Source name
Col-0
Organism
Arabidopsis thaliana
Characteristics
Tissue: leaves 1 + 2
Extracted molecule
total RNA
Label
biotin
Description
Photoperiod: continuous light
Relative humidity: 65%
Substrate: soil
Temperature: 23oC
Data processing
The data were analysed using Affymetrix Microarray Suite 5.0 (MAS5)
Submission date
Aug 25, 2006
Last update date
Aug 28, 2018
Contact name
Nottingham Arabidopsis Stock Centre (NASC)
E-mail(s)
affy@arabidopsis.info
Phone
+44 (0)115 951 3237
Fax
+44 (0)115 951 3297
URL
http://arabidopsis.info/
Organization name
Nottingham Arabidopsis Stock Centre (NASC)
Department
School of Biosciences, University of Nottingham
Street address
Sutton Bonington Campus
City
Loughborough
ZIP/Postal code
LE12 5RD
Country
United Kingdom
Platform ID
GPL198
Series (1)
GSE5630
AtGenExpress: Developmental series (leaves)
Relations
Reanalyzed by
GSE118579
Reanalyzed by
GSE119083
Data table header descriptions
ID_REF
VALUE
This is the final calculated measurement for each probe set identifier that has been made comparable across all samples and rows
ABS_CALL
A qualitative measurement indicating if the probe set is detected
DETECTION P-VALUE
A p-value indicating the significance of the Detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-r2-P1-cre-5_at
3.02066064453125E+003
P
2.44141003349796E-004
AFFX-r2-P1-cre-3_at
3.13111230468750E+003
P
2.44141003349796E-004
AFFX-r2-Ec-bioD-5_at
4.62299957275391E+002
P
2.44141003349796E-004
AFFX-r2-Ec-bioD-3_at
6.09449645996094E+002
P
2.44141003349796E-004
AFFX-r2-Ec-bioC-5_at
1.72850341796875E+002
P
2.44141003349796E-004
AFFX-r2-Ec-bioC-3_at
1.83921310424805E+002
P
2.44141003349796E-004
AFFX-r2-Ec-bioB-M_at
8.11752166748047E+001
P
2.44141003349796E-004
AFFX-r2-Ec-bioB-5_at
5.31044349670410E+001
P
2.44141003349796E-004
AFFX-r2-Ec-bioB-3_at
6.70919189453125E+001
P
2.44141003349796E-004
AFFX-r2-Bs-thr-M_s_at
7.21065711975098E+000
A
5.33936023712158E-001
AFFX-r2-Bs-thr-5_s_at
1.51400146484375E+001
M
5.61522990465164E-002
AFFX-r2-Bs-thr-3_s_at
2.21649956703186E+000
A
8.28612983226776E-001
AFFX-r2-Bs-phe-M_at
3.44655203819275E+000
A
1.29638999700546E-001
AFFX-r2-Bs-phe-5_at
4.77044343948364E+000
A
5.00000000000000E-001
AFFX-r2-Bs-phe-3_at
5.40677690505981E+000
A
4.32372987270355E-001
AFFX-r2-Bs-lys-M_at
1.66852855682373E+000
A
5.00000000000000E-001
AFFX-r2-Bs-lys-5_at
6.04795753955841E-001
A
6.65526986122131E-001
AFFX-r2-Bs-lys-3_at
4.90650272369385E+000
A
1.94580003619194E-001
AFFX-r2-Bs-dap-M_at
3.06731164455414E-001
A
5.33936023712158E-001
AFFX-r2-Bs-dap-5_at
1.25392603874207E+000
A
9.19434010982513E-001
Total number of rows:
22810
Table truncated, full table size
1250 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM131498.CEL.gz
2.2 Mb
(ftp)
(http)
CEL
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