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Sample GSM131104 Query DataSets for GSM131104
Status Public on Jan 08, 2007
Title Broadley_1-2_A2-Bo-P-phosphate-starved_Rep1_ATH1
Sample type RNA
Source name oleracea
Organism Arabidopsis thaliana
Characteristics Tissue: shoot tissue
Genetic variation: Brassica oleracea var. alboglabra (A12dH)
Extracted molecule total RNA
Label biotin
Description Light: 16 h daylength
Medium: compost
Temperature: 22°C
Humidity: 70-80%
Watering regime: watered daily with deionised water
Stratification: 3 to 5 days in sterile distilled water at 4°C
Data processing The data were analysed using Affymetrix Microarray Suite 5.0 (MAS5)
Submission date Aug 25, 2006
Last update date Aug 28, 2018
Contact name Nottingham Arabidopsis Stock Centre (NASC)
Phone +44 (0)115 951 3237
Fax +44 (0)115 951 3297
Organization name Nottingham Arabidopsis Stock Centre (NASC)
Department School of Biosciences, University of Nottingham
Street address Sutton Bonington Campus
City Loughborough
ZIP/Postal code LE12 5RD
Country United Kingdom
Platform ID GPL198
Series (1)
GSE5614 Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study)
Reanalyzed by GSE119083

Data table header descriptions
VALUE This is the final calculated measurement for each probe set identifier that has been made comparable across all samples and rows
ABS_CALL A qualitative measurement indicating if the probe set is detected
DETECTION P-VALUE A p-value indicating the significance of the Detection call

Data table
AFFX-r2-P1-cre-5_at 1.40728000000000E+004 P 2.44000000000000E-004
AFFX-r2-P1-cre-3_at 1.57609000000000E+004 P 2.44000000000000E-004
AFFX-r2-Ec-bioD-5_at 2.43010000000000E+003 P 2.44000000000000E-004
AFFX-r2-Ec-bioD-3_at 2.71480000000000E+003 P 2.44000000000000E-004
AFFX-r2-Ec-bioC-5_at 7.88600000000000E+002 P 2.44000000000000E-004
AFFX-r2-Ec-bioC-3_at 1.03170000000000E+003 P 2.44000000000000E-004
AFFX-r2-Ec-bioB-M_at 4.52100000000000E+002 P 2.44000000000000E-004
AFFX-r2-Ec-bioB-5_at 2.53400000000000E+002 P 2.44000000000000E-004
AFFX-r2-Ec-bioB-3_at 3.20200000000000E+002 P 7.32000000000000E-004
AFFX-r2-Bs-thr-M_s_at 5.52000000000000E+001 A 3.98926000000000E-001
AFFX-r2-Bs-thr-5_s_at 7.40000000000000E+001 A 6.76270000000000E-002
AFFX-r2-Bs-thr-3_s_at 8.70000000000000E+000 A 8.70361000000000E-001
AFFX-r2-Bs-phe-M_at 1.70000000000000E+001 A 3.66211000000000E-001
AFFX-r2-Bs-phe-5_at 1.93000000000000E+001 A 5.00000000000000E-001
AFFX-r2-Bs-phe-3_at 6.20000000000000E+000 A 6.33789000000000E-001
AFFX-r2-Bs-lys-M_at 1.01000000000000E+001 A 5.00000000000000E-001
AFFX-r2-Bs-lys-5_at 1.23000000000000E+001 A 3.98926000000000E-001
AFFX-r2-Bs-lys-3_at 8.12000000000000E+001 A 8.05660000000000E-002
AFFX-r2-Bs-dap-M_at 2.22000000000000E+001 A 3.98926000000000E-001
AFFX-r2-Bs-dap-5_at 2.00000000000000E+000 A 9.32373000000000E-001

Total number of rows: 22810

Table truncated, full table size 1250 Kbytes.

Supplementary file Size Download File type/resource
GSM131104.CEL.gz 2.2 Mb (ftp)(http) CEL
Raw data provided as supplementary file

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