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Sample GSM131104 Query DataSets for GSM131104
Status Public on Jan 08, 2007
Title Broadley_1-2_A2-Bo-P-phosphate-starved_Rep1_ATH1
Sample type RNA
 
Source name oleracea
Organism Arabidopsis thaliana
Characteristics Tissue: shoot tissue
Genetic variation: Brassica oleracea var. alboglabra (A12dH)
Extracted molecule total RNA
Label biotin
 
Description Light: 16 h daylength
Medium: compost
Temperature: 22°C
Humidity: 70-80%
Watering regime: watered daily with deionised water
Stratification: 3 to 5 days in sterile distilled water at 4°C
Data processing The data were analysed using Affymetrix Microarray Suite 5.0 (MAS5)
 
Submission date Aug 25, 2006
Last update date Aug 28, 2018
Contact name Nottingham Arabidopsis Stock Centre (NASC)
E-mail(s) affy@arabidopsis.info
Phone +44 (0)115 951 3237
Fax +44 (0)115 951 3297
URL http://arabidopsis.info/
Organization name Nottingham Arabidopsis Stock Centre (NASC)
Department School of Biosciences, University of Nottingham
Street address Sutton Bonington Campus
City Loughborough
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platform ID GPL198
Series (1)
GSE5614 Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study)
Relations
Reanalyzed by GSE119083

Data table header descriptions
ID_REF
VALUE This is the final calculated measurement for each probe set identifier that has been made comparable across all samples and rows
ABS_CALL A qualitative measurement indicating if the probe set is detected
DETECTION P-VALUE A p-value indicating the significance of the Detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-r2-P1-cre-5_at 1.40728000000000E+004 P 2.44000000000000E-004
AFFX-r2-P1-cre-3_at 1.57609000000000E+004 P 2.44000000000000E-004
AFFX-r2-Ec-bioD-5_at 2.43010000000000E+003 P 2.44000000000000E-004
AFFX-r2-Ec-bioD-3_at 2.71480000000000E+003 P 2.44000000000000E-004
AFFX-r2-Ec-bioC-5_at 7.88600000000000E+002 P 2.44000000000000E-004
AFFX-r2-Ec-bioC-3_at 1.03170000000000E+003 P 2.44000000000000E-004
AFFX-r2-Ec-bioB-M_at 4.52100000000000E+002 P 2.44000000000000E-004
AFFX-r2-Ec-bioB-5_at 2.53400000000000E+002 P 2.44000000000000E-004
AFFX-r2-Ec-bioB-3_at 3.20200000000000E+002 P 7.32000000000000E-004
AFFX-r2-Bs-thr-M_s_at 5.52000000000000E+001 A 3.98926000000000E-001
AFFX-r2-Bs-thr-5_s_at 7.40000000000000E+001 A 6.76270000000000E-002
AFFX-r2-Bs-thr-3_s_at 8.70000000000000E+000 A 8.70361000000000E-001
AFFX-r2-Bs-phe-M_at 1.70000000000000E+001 A 3.66211000000000E-001
AFFX-r2-Bs-phe-5_at 1.93000000000000E+001 A 5.00000000000000E-001
AFFX-r2-Bs-phe-3_at 6.20000000000000E+000 A 6.33789000000000E-001
AFFX-r2-Bs-lys-M_at 1.01000000000000E+001 A 5.00000000000000E-001
AFFX-r2-Bs-lys-5_at 1.23000000000000E+001 A 3.98926000000000E-001
AFFX-r2-Bs-lys-3_at 8.12000000000000E+001 A 8.05660000000000E-002
AFFX-r2-Bs-dap-M_at 2.22000000000000E+001 A 3.98926000000000E-001
AFFX-r2-Bs-dap-5_at 2.00000000000000E+000 A 9.32373000000000E-001

Total number of rows: 22810

Table truncated, full table size 1250 Kbytes.




Supplementary file Size Download File type/resource
GSM131104.CEL.gz 2.2 Mb (ftp)(http) CEL
Raw data provided as supplementary file

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