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Sample GSM1279991 Query DataSets for GSM1279991
Status Public on Jan 06, 2014
Title Primary tumour region, EV007-R9
Sample type RNA
 
Source name Primary tumour region
Organism Homo sapiens
Characteristics tissue: clear cell renal cell carcinoma
age: 59
Sex: F
patient identifier: EV007
Growth protocol Fresh frozen.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted.
Label biotin
Label protocol Affymetrix protocol.
 
Hybridization protocol Exon 1.0 ST Cocktail hybridization.
Scan protocol PICR scanner 3000.
Description EV007-R9
Gene expression from a primary tumour region.
Data processing The expression values of the samples were normalized using the oligo R package.
 
Submission date Dec 04, 2013
Last update date Jan 07, 2014
Contact name Pierre Martinez
Organization name Cancer Research Centre of Lyon
Street address 28 rue Laennec
City Lyon cedex 08
ZIP/Postal code 69373
Country France
 
Platform ID GPL6244
Series (1)
GSE53000 Expression data from spatially separated samples of different ccRCC patients

Data table header descriptions
ID_REF
VALUE Log2 RMA signal (oligo::rma)

Data table
ID_REF VALUE
7892501 2.964062131
7892502 5.39609975
7892503 4.469058499
7892504 8.497947262
7892505 3.167751238
7892506 5.846079308
7892507 6.670442308
7892508 6.829336382
7892509 11.5632559
7892510 5.536169837
7892511 4.317452898
7892512 7.808705615
7892513 3.158419286
7892514 10.85849581
7892515 10.28207762
7892516 4.198781608
7892517 6.708143668
7892518 3.674804815
7892519 6.662862354
7892520 9.81234291

Total number of rows: 33297

Table truncated, full table size 646 Kbytes.




Supplementary file Size Download File type/resource
GSM1279991_EV007-R9.CEL.gz 4.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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