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Sample GSM126561 Query DataSets for GSM126561
Status Public on Oct 01, 2006
Title 16hvsRef
Sample type RNA
 
Channel 1
Source name 16 hour
Organism Burkholderia pseudomallei K96243
Characteristics Strain: K96243
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction, Megaclear Ambion purification of total RNA, MICROBexpress Ambion Bacterial Messenger RNA extraction Kit"
Label Cy3
Label protocol Approximately 1.5ug of mRNA was processed to produce amino-allyl labelled cDNA
 
Channel 2
Source name Reference
Organism Burkholderia pseudomallei K96243
Characteristics Strain: K96243
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction, Megaclear Ambion purification of total RNA, MICROBexpress Ambion Bacterial Messenger RNA extraction Kit"
Label Cy5
Label protocol Approximately 1.5ug of mRNA was processed to produce amino-allyl labelled cDNA
 
 
Hybridization protocol J. David Gladstone Institutes Genomic Core Laboratory SOP
Scan protocol J. David Gladstone Institutes Genomic Core Laboratory SOP
Description Series of 47 timed samples
Data processing GeneData Expressionist
 
Submission date Aug 10, 2006
Last update date Aug 14, 2006
Contact name Fiona Rodrigues
Organization name Genome Institute of Singapore
Department Cell and Medical Biology
Lab 4
Street address 60 Biopolis Street, #02-01 Genome
City Singapore
ZIP/Postal code 138672
Country Singapore
 
Platform ID GPL4078
Series (1)
GSE5495 Genome-Wide Mapping of Growth Regulated Genes in Burkholderia pseudomallei

Data table header descriptions
ID_REF
VALUE Normalised log ratios; data normalised using a LOWESS protocol; missing profiles are estimted using SVDImpute

Data table
ID_REF VALUE
159903 0.264039
160003 0.043444
160103 -0.65564
160203 0.050092
160803 -0.00173
161403 0.087524
162103 -0.029067
162203 0.03124
162403 -0.137653
162503 -0.091008
162603 0.116019
163703 -0.030704
164103 -0.060597
164603 0.064121
165503 -0.028381
165603 0.053677
166103 0.18935
166203 0.004775
166403 0.013481
166903 0.014223

Total number of rows: 5289

Table truncated, full table size 88 Kbytes.




Supplementary file Size Download File type/resource
GSM126561.gpr.gz 1.3 Mb (ftp)(http) GPR

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