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Sample GSM126547 Query DataSets for GSM126547
Status Public on Oct 01, 2006
Title 9hvsRef
Sample type RNA
 
Channel 1
Source name 9 hour
Organism Burkholderia pseudomallei K96243
Characteristics Strain: K96243
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction, Megaclear Ambion purification of total RNA, MICROBexpress Ambion Bacterial Messenger RNA extraction Kit"
Label Cy3
Label protocol Approximately 1.5ug of mRNA was processed to produce amino-allyl labelled cDNA
 
Channel 2
Source name Reference
Organism Burkholderia pseudomallei K96243
Characteristics Strain: K96243
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction, Megaclear Ambion purification of total RNA, MICROBexpress Ambion Bacterial Messenger RNA extraction Kit"
Label Cy5
Label protocol Approximately 1.5ug of mRNA was processed to produce amino-allyl labelled cDNA
 
 
Hybridization protocol J. David Gladstone Institutes Genomic Core Laboratory SOP
Scan protocol J. David Gladstone Institutes Genomic Core Laboratory SOP
Description Series of 47 timed samples
Data processing GeneData Expressionist
 
Submission date Aug 10, 2006
Last update date Aug 14, 2006
Contact name Fiona Rodrigues
Organization name Genome Institute of Singapore
Department Cell and Medical Biology
Lab 4
Street address 60 Biopolis Street, #02-01 Genome
City Singapore
ZIP/Postal code 138672
Country Singapore
 
Platform ID GPL4078
Series (1)
GSE5495 Genome-Wide Mapping of Growth Regulated Genes in Burkholderia pseudomallei

Data table header descriptions
ID_REF
VALUE Normalised log ratios; data normalised using a LOWESS protocol; missing profiles are estimted using SVDImpute

Data table
ID_REF VALUE
159903 -0.012002
160003 -0.028205
160103 -0.194631
160203 0.002982
160803 -0.072318
161403 -0.070824
162103 -0.084244
162203 0.010776
162403 0.012401
162503 0.043315
162603 -0.063856
163703 -0.079518
164103 -0.133027
164603 -0.020376
165503 -0.010902
165603 -0.045755
166103 0.116473
166203 0.038973
166403 0.01807
166903 -0.072913

Total number of rows: 5289

Table truncated, full table size 89 Kbytes.




Supplementary file Size Download File type/resource
GSM126547.gpr.gz 1.3 Mb (ftp)(http) GPR

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