|
| Status |
Public on May 14, 2007 |
| Title |
ER negative human primary breast tumor EA02014_41297_H133A_JA-2001 |
| Sample type |
RNA |
| |
|
| Source name |
Primary human breast tumor
|
| Organism |
Homo sapiens |
| Characteristics |
ID: 2001
cohort: Erasmus
metastasis: 1
lung met first event: 1
lung met all: 1
metastasis free survival (yr): 0.363388
lung met free survival (yr): 0.363388
lms status: 1
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNAzol B extraction of total RNA was performed according to the manufacturer's instructions.
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared according to the standard Affymetrix protocol
|
| |
|
| Hybridization protocol |
cRNA were hybridized to the Affymetrix U133a GeneChip according to manufacturer's protocols.
|
| Scan protocol |
standard Affymetrix protocol
|
| Description |
Gene expression data from ER negative human primary breast tumor
|
| Data processing |
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0).
|
| |
|
| Submission date |
Jul 17, 2006 |
| Last update date |
Sep 23, 2011 |
| Contact name |
Andy J Minn |
| Organization name |
University of Chicago
|
| Street address |
924 E. 57th Street
|
| City |
Chicago |
| State/province |
IL |
| ZIP/Postal code |
60637 |
| Country |
USA |
| |
|
| Platform ID |
GPL96 |
| Series (1) |
| GSE5327 |
Breast cancer relapse free survival and lung metastasis free survival |
|
| Relations |
| Reanalyzed by |
GSE31519 |
