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Sample GSM1084609 Query DataSets for GSM1084609
Status Public on May 16, 2013
Title Blood_BMS_MVL372-1
Sample type RNA
 
Source name whole blood from offspring born before maternal bariatric surgery
Organism Homo sapiens
Characteristics status: BMS
Sex: Female
tissue: Whole blood
Treatment protocol Born before (BMS) or after (AMS) maternal bariatric surgery
Growth protocol Blood samples were collected after an over-night fast from an antecubital vein
Extracted molecule total RNA
Extraction protocol PAXgene™ Blood RNA Kit (Qiagen)
Label biotin
Label protocol See Illumina protocols
 
Hybridization protocol See Illumina protocols
Scan protocol See Illumina protocols
Data processing Lumi algorithm was used for expression data correction and normalization (RMA background adjustment; log base 2 variance stabilization; quantile normalization). A probe had to show a detection p-value ≤ 0.05 in at least 25% of samples of a group to be considered as detected.
 
Submission date Feb 19, 2013
Last update date May 16, 2013
Contact name Frederic Guenard
Organization name Laval University
Street address 2440, Hochelage blvd
City Quebec
ZIP/Postal code G1V 0A6
Country Canada
 
Platform ID GPL10558
Series (1)
GSE44407 Gene expression profile in offspring born before vs. after maternal bariatric surgery

Data table header descriptions
ID_REF
VALUE FlexArray software computed normalized signal intensity

Data table
ID_REF VALUE
ILMN_1802380 8.922663854
ILMN_1792389 4.664491396
ILMN_1854015 4.07934733
ILMN_1705423 3.553944398
ILMN_1681845 6.813513327
ILMN_1791820 2.952244211
ILMN_1800425 7.478336699
ILMN_1728019 7.419408974
ILMN_1783852 3.13149459
ILMN_1787840 3.417329972
ILMN_3260070 8.109481589
ILMN_1721344 8.792626591
ILMN_1892501 3.231868948
ILMN_1679973 3.322098763
ILMN_1701854 7.310893143
ILMN_1678707 7.886294725
ILMN_1778226 6.418908787
ILMN_1669674 8.736253801
ILMN_1678052 5.297825023
ILMN_1682812 3.327040932

Total number of rows: 16060

Table truncated, full table size 390 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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