|
| Status |
Public on Dec 31, 2013 |
| Title |
SPN-3 |
| Sample type |
RNA |
| |
|
| Source name |
solid-pseudopapillary neoplasm
|
| Organism |
Homo sapiens |
| Characteristics |
gender: male
age: 70
tissue: Solid-pseudopapillary neoplasm of pancreas (SPN)
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was obtained from each independent tissue of patient and extracted using TRIzol Reagent (Invitrogen). RNA quality control was performed with Bio-Rad Experion.
|
| Label |
Cy3-streptavidin
|
| Label protocol |
Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
Standard Illumina scanning protocol
|
| Description |
Total RNA was obtained from each independent tissue of patient
|
| Data processing |
The data were normalised using quantile normalization method with beadarray version 1.10 and lumi version 1.8.3 in R/Bioconductor package.
|
| |
|
| Submission date |
Jan 28, 2013 |
| Last update date |
Dec 31, 2013 |
| Contact name |
minhee park |
| Organization name |
student
|
| Street address |
shinchondong
|
| City |
seoul |
| ZIP/Postal code |
120-752 |
| Country |
South Korea |
| |
|
| Platform ID |
GPL10558 |
| Series (2) |
| GSE43795 |
Gene expression of pancreatic tumors |
| GSE43797 |
Characterization of mRNA and microRNA expression profiles in solid-pseudopapillary neoplasm of pancreas, ductal adenocarcinoma and pancreatic neuroendocrine tumors |
|
