|
Status |
Public on Jan 14, 2013 |
Title |
AG03364 |
Sample type |
genomic |
|
|
Source name |
Werner Syndrome
|
Organism |
Homo sapiens |
Characteristics |
gender: Male health state: Werner Syndrome cell type: EBV immortalized B-cells genotype/variation: Non-mutant patient
|
Extracted molecule |
genomic DNA |
Extraction protocol |
genomic DNA extraction
|
Label |
Cy3, Cy5
|
Label protocol |
Standard Illumina labelling protocol
|
|
|
Hybridization protocol |
Bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
|
Scan protocol |
Arrays were imaged using High Scan SQ using standard recommended Illumina scanner setting
|
Data processing |
The intensities of the images are extracted using GenomeStudio (2010.3) Methylation module (1.8.5) software. Methylation score of each CpG is represented as beta value.
|
|
|
Submission date |
Dec 12, 2012 |
Last update date |
Jan 14, 2013 |
Contact name |
Manel Esteller |
Organization name |
IDIBELL
|
Department |
PEBC
|
Lab |
Cancer Epigenetics
|
Street address |
Hospital Duran i Reynals Av. Gran Via s/n km, 2.7
|
City |
L'Hospitalet de Llobregat |
State/province |
Barcelona |
ZIP/Postal code |
08908 |
Country |
Spain |
|
|
Platform ID |
GPL13534 |
Series (1) |
GSE42865 |
Genome-wide DNA methylation profiling of Progeria and Werner syndrome patients |
|