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Sample GSM102066

Query DataSets for GSM102066

Status

Public on Mar 30, 2006

Title

YUCAL

Sample type

RNA

Source name

metastatic melanoma culture

Organism

Characteristics

Gender: female

Extracted molecule

polyA RNA

Label

biotin

Description

Culture was made from a soft tissue metastasis of melanoma.

Data processing

MAS5.0

Submission date

Mar 29, 2006

Last update date

Mar 29, 2006

Contact name

Keith S Hoek

E-mail(s)

keith.hoek@usz.ch

URL

http://www.jurmo.ch/work.html

Organization name

Currently unaffilliated

Street address

private

City

Zürich

ZIP/Postal code

8004

Country

Switzerland

Platform ID

Series (1)

Expression profiling reveals novel pathways in the transformation of melanocytes to melanomas.

Data table header descriptions
ID_REF
VALUE	Scaled signal intensity data
ABS_CALL	Detection call: Present (P), Marginal (M) or Absent (A)
DETECTION P-VALUE	Significance of the detection call

Data table
ID_REF	VALUE	ABS_CALL	DETECTION P-VALUE
AFFX-BioB-5_at	253.2	P	0.006187
AFFX-BioB-M_at	350.9	P	0.00141
AFFX-BioB-3_at	175.6	P	0.002275
AFFX-BioC-5_at	786.5	P	0.000169
AFFX-BioC-3_at	544.5	P	0.000225
AFFX-BioDn-5_at	713.4	P	0.000147
AFFX-BioDn-3_at	4052.2	P	0.000581
AFFX-CreX-5_at	7080.7	P	0.000044
AFFX-CreX-3_at	8943.2	P	0.000044
AFFX-DapX-5_at	20.3	A	0.195266
AFFX-DapX-M_at	38.7	A	0.165861
AFFX-DapX-3_at	12.1	A	0.760937
AFFX-LysX-5_at	22.2	A	0.470241
AFFX-LysX-M_at	12.1	A	0.724854
AFFX-LysX-3_at	18.1	A	0.165861
AFFX-PheX-5_at	4.2	A	0.804734
AFFX-PheX-M_at	5.1	A	0.904333
AFFX-PheX-3_at	49.1	A	0.382599
AFFX-ThrX-5_at	13.1	A	0.804734
AFFX-ThrX-M_at	14.8	A	0.574038

Total number of rows: 22283

Table truncated, full table size 593 Kbytes.

Supplementary data files not provided

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