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Sample GSM102065

Query DataSets for GSM102065

Status

Public on Mar 30, 2006

Title

WW165

Sample type

RNA

Source name

primary melanoma culture

Organism

Homo sapiens

Characteristics

Gender: female
Source tissue: primary melanoma

Extracted molecule

polyA RNA

Label

biotin

Description

Culture was made from a 2.25 mm lesion removed from the back.

Data processing

MAS5.0

Submission date

Mar 29, 2006

Last update date

Mar 29, 2006

Contact name

Keith S Hoek

E-mail(s)

keith.hoek@usz.ch

URL

http://www.jurmo.ch/work.html

Organization name

Currently unaffilliated

Street address

private

City

Zürich

ZIP/Postal code

8004

Country

Switzerland

Platform ID

GPL96

Series (1)

GSE4570

Expression profiling reveals novel pathways in the transformation of melanocytes to melanomas.

Data table header descriptions
ID_REF
VALUE	Scaled signal intensity data
ABS_CALL	Detection call: Present (P), Marginal (M) or Absent (A)
DETECTION P-VALUE	Significance of the detection call

Data table
ID_REF	VALUE	ABS_CALL	DETECTION P-VALUE
AFFX-BioB-5_at	413.1	P	0.002556
AFFX-BioB-M_at	671.3	P	0.000258
AFFX-BioB-3_at	357.1	P	0.001102
AFFX-BioC-5_at	1202.1	P	0.000127
AFFX-BioC-3_at	814.2	P	0.000147
AFFX-BioDn-5_at	1191.7	P	0.000095
AFFX-BioDn-3_at	5516.7	P	0.000225
AFFX-CreX-5_at	10335.6	P	0.000044
AFFX-CreX-3_at	14602.4	P	0.000044
AFFX-DapX-5_at	34.5	A	0.216524
AFFX-DapX-M_at	41.4	A	0.089478
AFFX-DapX-3_at	6.5	A	0.883887
AFFX-LysX-5_at	18.6	A	0.5
AFFX-LysX-M_at	51.1	A	0.559354
AFFX-LysX-3_at	9.8	A	0.686277
AFFX-PheX-5_at	4.8	A	0.945787
AFFX-PheX-M_at	4.2	A	0.883887
AFFX-PheX-3_at	48.3	A	0.354453
AFFX-ThrX-5_at	19.3	A	0.645547
AFFX-ThrX-M_at	16.2	A	0.617401

Total number of rows: 22283

Table truncated, full table size 591 Kbytes.

Supplementary data files not provided