|
Status |
Public on May 10, 2006 |
Title |
A172_2 |
Sample type |
RNA |
|
|
Source name |
Tumor cell line A172
|
Organism |
Homo sapiens |
Characteristics |
commonly used glioma line
|
Extracted molecule |
total RNA |
Extraction protocol |
Trizol extraction of total RNA was performed according to the manufacturer's instructions.
|
Label |
biotin
|
Label protocol |
Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
|
|
|
Hybridization protocol |
Standard Affymetrix procedures
|
Scan protocol |
Standard Affymetrix procedures
|
Description |
Tumor cell line A172, cultured in serum
|
Data processing |
Affymetrix GCOS 1.2 with default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
|
|
|
Submission date |
Mar 24, 2006 |
Last update date |
Aug 28, 2018 |
Contact name |
Howard Fine |
E-mail(s) |
hfine@mail.nih.gov
|
Phone |
301-402-6383
|
Fax |
301-480-2246
|
Organization name |
National Cancer Institute
|
Department |
Neurological Disorders and Stroke
|
Street address |
9030 Old Georgetown Rd
|
City |
Bethesda |
State/province |
MD |
ZIP/Postal code |
20892 |
Country |
USA |
|
|
Platform ID |
GPL570 |
Series (1) |
GSE4536 |
Tumor stem cells more closely mirror the phenotype and genotype of primary human tumors than do cancer cell lines |
|
Relations |
Reanalyzed by |
GSE119087 |