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Sample GSM1014536 Query DataSets for GSM1014536
Status Public on Oct 03, 2012
Title UW_DnaseDgf_T-47D
Sample type SRA
Source name T-47D
Organism Homo sapiens
Characteristics lab: UW
lab description: Stamatoyannopoulous - University of Washington
datatype: DnaseDgf
datatype description: DNase Digital Footprinting
cell: T-47D
cell organism: human
cell description: epithelial cell line derived from a mammary ductal carcinoma.
cell karyotype: cancer
cell sex: F
treatment: None
treatment description: No special treatment or protocol applies
labexpid: DS19794
labversion: Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75
Biomaterial provider ATCC
Treatment protocol None
Extracted molecule genomic DNA
Extraction protocol For more information, see
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina HiSeq 2000
Data processing
Submission date Oct 03, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL11154
Series (1)
GSE26328 DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]
SRA SRX193608
BioSample SAMN01761116
Named Annotation GSM1014536_hg19_wgEncodeUwDgfT47dRaw.bigWig
Named Annotation GSM1014536_hg19_wgEncodeUwDgfT47dSig.bigWig

Supplementary file Size Download File type/resource
GSM1014536_hg19_wgEncodeUwDgfT47dHotspots.broadPeak.gz 3.8 Mb (ftp)(http) BROADPEAK
GSM1014536_hg19_wgEncodeUwDgfT47dPk.narrowPeak.gz 2.7 Mb (ftp)(http) NARROWPEAK
GSM1014536_hg19_wgEncodeUwDgfT47dRaw.bigWig 345.6 Mb (ftp)(http) BIGWIG
GSM1014536_hg19_wgEncodeUwDgfT47dSig.bigWig 544.1 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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