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Sample GSM1014532 Query DataSets for GSM1014532
Status Public on Oct 03, 2012
Title UW_DnaseDgf_HMVEC-dBl-Neo
Sample type SRA
Source name HMVEC-dBl-Neo
Organism Homo sapiens
Characteristics lab: UW
lab description: Stamatoyannopoulous - University of Washington
datatype: DnaseDgf
datatype description: DNase Digital Footprinting
cell: HMVEC-dBl-Neo
cell organism: human
cell description: neonatal blood microvascular endothelial cells, dermal-derived
cell karyotype: normal
cell lineage: mesoderm
cell sex: M
labexpid: DS13242
labversion: Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75
Biomaterial provider Lonza
Growth protocol HMVEC-dBl-Neo_Stam_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol For more information, see
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina HiSeq 2000
Data processing
Submission date Oct 03, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL11154
Series (1)
GSE26328 DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]
SRA SRX193604
BioSample SAMN01761113
Named Annotation GSM1014532_hg19_wgEncodeUwDgfHmvecdRaw.bigWig
Named Annotation GSM1014532_hg19_wgEncodeUwDgfHmvecdSig.bigWig

Supplementary file Size Download File type/resource
GSM1014532_hg19_wgEncodeUwDgfHmvecdHotspots.broadPeak.gz 2.8 Mb (ftp)(http) BROADPEAK
GSM1014532_hg19_wgEncodeUwDgfHmvecdPk.narrowPeak.gz 2.3 Mb (ftp)(http) NARROWPEAK
GSM1014532_hg19_wgEncodeUwDgfHmvecdRaw.bigWig 347.5 Mb (ftp)(http) BIGWIG
GSM1014532_hg19_wgEncodeUwDgfHmvecdSig.bigWig 558.0 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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