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Sample GSM1014527 Query DataSets for GSM1014527
Status Public on Oct 03, 2012
Title UW_DnaseDgf_AG10803
Sample type SRA
Source name AG10803
Organism Homo sapiens
Characteristics lab: UW
lab description: Stamatoyannopoulous - University of Washington
datatype: DnaseDgf
datatype description: DNase Digital Footprinting
cell: AG10803
cell organism: human
cell description: abdominal skin fibroblasts from apparently heathly 22 year old, "8% of the cells examined showing random chromosome loss, 2% showing random chromosome gain, and 2% showing 69,XYY" -Coriell
cell sex: M
labexpid: DS12374
labversion: Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75
Biomaterial provider Coriell
Growth protocol AG10803_Stam_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol For more information, see
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina HiSeq 2000
Data processing
Submission date Oct 03, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL11154
Series (1)
GSE26328 DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]
SRA SRX193599
BioSample SAMN01761108
Named Annotation GSM1014527_hg19_wgEncodeUwDgfAg10803Raw.bigWig
Named Annotation GSM1014527_hg19_wgEncodeUwDgfAg10803Sig.bigWig

Supplementary file Size Download File type/resource
GSM1014527_hg19_wgEncodeUwDgfAg10803Hotspots.broadPeak.gz 3.4 Mb (ftp)(http) BROADPEAK
GSM1014527_hg19_wgEncodeUwDgfAg10803Pk.narrowPeak.gz 2.7 Mb (ftp)(http) NARROWPEAK
GSM1014527_hg19_wgEncodeUwDgfAg10803Raw.bigWig 306.1 Mb (ftp)(http) BIGWIG
GSM1014527_hg19_wgEncodeUwDgfAg10803Sig.bigWig 404.2 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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